Protein Alignment rl and CAK4

DIOPT Version :10

• Sequence 1: NP_001015122.1
• Gene: rl / 3354888
• FlyBaseID: FBgn0003256
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_176847.1
• Gene: CAK4 / 842993
• AraportID: AT1G66750
• Length: 348
• Species: Arabidopsis thaliana
• Alignment Length: 290
• Identity: 54/290 - (18%)
• Similarity: 87/290 - (30%)
• Gaps: 122/290 - (42%)

  Fly    47 VVTTGNGNGLKRP--------ATLELNLGPGKARKTRYNTSITMPSVLPSPDLQMLKLVSPELEK 103
            |:..|:.:.:..|        ||     .|...|||:.|:|.|  .:|||
plant     5 VIVFGSSSAITNPHHHHRRCYAT-----APESNRKTKSNSSFT--KLLPS--------------- 47

  Fly   104 IISTNATLP---TPTPSAIIFPPSATSEQQQFAKGFEDALLSIHKKDTTSKLNTNVPTNTTSNNN 165
                   ||   :|:|:::....|.:|......:...|..|..: .|..|||
plant    48 -------LPQQHSPSPASVSATHSLSSHFSNVVRWIPDGSLEYY-ADFASKL------------- 91

  Fly   166 NNNSSTSNNNNNNSANSVTLVGPSAIERLCPTTAAVAPVTAIATANTATGMAAATVGHHTGMSGG 230
                     ..:.....|.|:                       |.|....:.|.|.....|
plant    92 ---------AEDGRIEDVALI-----------------------AETLAAESGANVARFASM--- 121

  Fly   231 EITYTNLDYPGVVKEEPQPTTSAASN----------------QSPPVSPIDMESQERIKLERKRL 279
                  :||..:.|       ..:||                :...::|:|:.....:||.||:.
plant   122 ------VDYDLLSK-------GISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQF 173

  Fly   280 R---NRVAASKCRKRKLERISKLEDRVKEL 306
            |   |.|...|... .:|.::.|..::|||
plant   174 RAMANSVQVEKAID-LMEILAGLGFKIKEL 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rl	NP_001015122.1	STKc_ERK1_2_like	32..366	CDD:270839	54/290 (19%)
CAK4	NP_176847.1	STKc_CDK7	12..305	CDD:270833	52/283 (18%)