DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and AT1G53050

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_175713.1 Gene:AT1G53050 / 841739 AraportID:AT1G53050 Length:694 Species:Arabidopsis thaliana


Alignment Length:352 Identity:124/352 - (35%)
Similarity:173/352 - (49%) Gaps:46/352 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKISPFEHQTYCQRTL-REITIL 88
            |.|||.:......:.||..||:|.|..|..|.|....:.||:||:.....:....|.: |||.||
plant   121 EAIRGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIQIL 185

  Fly    89 TRFKHENIIDIRDILRVDSIDQMR-DVYIVQCLMETDLYKLLK--TQRLSNDHICYFLYQILRGL 150
            .|..|.|||.:..::    ..:|. .:|:|...||.||..|..  ..:.|...:..:|.|:|.||
plant   186 RRLDHPNIIKLEGLV----TSRMSCSLYLVFEYMEHDLAGLASHPAIKFSESQVKCYLQQLLHGL 246

  Fly   151 KYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNS 215
            .:.||..|||||:|.||||::.:..|||.|||||...||.  .|..||..|.|.|||.||::|.:
plant   247 DHCHSRGVLHRDIKGSNLLIDNSGVLKIADFGLASFFDPR--QTQPLTSRVVTLWYRPPELLLGA 309

  Fly   216 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLES- 279
            ..|..::|:||.||||||:.:.:||.||:..::||:.|..:.|||:.|           .:::| 
plant   310 TRYGAAVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPTED-----------YWVKSR 363

  Fly   280 LP----FKPNVPWAKL-------FPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPG 333
            ||    |||..|:.:|       ||..   ||.||..:|:.||..|.....||...:......|.
plant   364 LPHATIFKPTQPYKRLVGETFKEFPQP---ALALLETLLSVNPDDRGTATAALKSEFFSTRPLPC 425

  Fly   334 D-------EPVAEVPFRINMENDDISR 353
            |       .|..|:..|:   .|:.||
plant   426 DPSSLPKYPPSKELDARM---RDEESR 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 120/345 (35%)
AT1G53050NP_175713.1 STKc_CDK9_like 134..418 CDD:270832 112/303 (37%)

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