DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and AT1G33770

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_174637.1 Gene:AT1G33770 / 840268 AraportID:AT1G33770 Length:614 Species:Arabidopsis thaliana


Alignment Length:354 Identity:117/354 - (33%)
Similarity:177/354 - (50%) Gaps:45/354 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NGTGS----TEVPQS-----------------NAEVIRGQIFEVGPRYIKLAYIGEGAYGMVVSA 55
            ||.|.    :.||:|                 ..|.|:|.:......:.||..||:|.|.:|..|
plant    94 NGKGGGLIISNVPRSAEAELIAAGWPYWLTSVAGEAIKGWVPRRADSFEKLDKIGQGTYSIVYKA 158

  Fly    56 DDTLTNQRVAIKKISPFEHQTYCQRTL-REITILTRFKHENIIDIRDILRVDSIDQMRDVYIVQC 119
            .|..|.:.||:||:..........|.: |||.||.:..|.|::.::.::   :......:::|..
plant   159 RDLETGKIVAMKKVRFANMDPESVRFMAREINILRKLDHPNVMKLQCLV---TSKLSGSLHLVFE 220

  Fly   120 LMETDL--YKLLKTQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFG 182
            .||.||  ..|....:.:...|..|:.|:|.||::.||..:||||:|.||||:|....|||.|||
plant   221 YMEHDLSGLALRPGVKFTEPQIKCFMKQLLCGLEHCHSRGILHRDIKGSNLLVNNDGVLKIGDFG 285

  Fly   183 LARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 247
            ||....|:.|..  ||..|.|.||||||::|.|..|..:||:|||||||||:...:||.||:..:
plant   286 LASFYKPDQDQP--LTSRVVTLWYRAPELLLGSTEYGPAIDLWSVGCILAELFVCKPIMPGRTEV 348

  Fly   248 DQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNVPWAKL----FPNADALALDLLGKMLT 308
            :|::.|..:.||||.:..      ....:.::..:||..|:.::    |.|..:.:||||.|:|:
plant   349 EQMHKIFKLCGSPSEEFW------NTTKFPQATSYKPQHPYKRVLLETFKNLSSSSLDLLDKLLS 407

  Fly   309 FNPHKRIPVEEALAHPYLEQYYDPGDEPV 337
            ..|.||......|    |.:::.  .||:
plant   408 VEPEKRCSASSTL----LSEFFT--TEPL 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 108/313 (35%)
AT1G33770NP_174637.1 STKc_CDK9_like 141..425 CDD:270832 106/298 (36%)

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