DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and AT1G03740

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_171870.4 Gene:AT1G03740 / 839423 AraportID:AT1G03740 Length:740 Species:Arabidopsis thaliana


Alignment Length:443 Identity:128/443 - (28%)
Similarity:197/443 - (44%) Gaps:103/443 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GSTEVPQSNAE--------------VIRGQIFEVGPR----YIKLAYIGEGAYGMVVSADDTLTN 61
            ||:.|...:||              |....:.:..||    :.||..||:|.|..|..|.|.|.|
plant   172 GSSIVSPKDAERKQVAAGWPSWLVSVAGESLVDWAPRRANTFEKLEKIGQGTYSSVYRARDLLHN 236

  Fly    62 QRVAIKKI----SPFEHQTYCQRTLREITILTRFKHENIIDIRDILR--VDSIDQMRDVYIVQCL 120
            :.||:||:    :..|...:   ..|||.::.|..|.|::.:..::.  |.|     .:|:|...
plant   237 KIVALKKVRFDLNDMESVKF---MAREIIVMRRLDHPNVLKLEGLITAPVSS-----SLYLVFEY 293

  Fly   121 METDLYKL--LKTQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGL 183
            |:.||..|  |...:.:...:..::.|:|.||::.||..|||||:|.||||::....|||.||||
plant   294 MDHDLLGLSSLPGVKFTEPQVKCYMRQLLSGLEHCHSRGVLHRDIKGSNLLIDSKGVLKIADFGL 358

  Fly   184 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 248
            |...||....:  ||.:|.|.|||.||::|.:..|...:|:||.||||.|:.:.:||.|||..::
plant   359 ATFFDPAKSVS--LTSHVVTLWYRPPELLLGASHYGVGVDLWSTGCILGELYAGKPILPGKTEVE 421

  Fly   249 QLNHILGVLGSPSRDDLECIINEKARNY--LESLP----FKPNVPW----AKLFPNADALALDLL 303
            ||:.|..:.|||:            .||  .:.||    ||..:|:    :::|.:..|..|.||
plant   422 QLHKIFKLCGSPT------------ENYWRKQKLPSSAGFKTAIPYRRKVSEMFKDFPASVLSLL 474

  Fly   304 GKMLTFNPHKRIPVEEALAHPYLE-----------QYYDPG--------DEPVAEVPFRINME-- 347
            ..:|:.:|..|...:.||...|.:           ..|.|.        ||...:.|.|...:  
plant   475 ETLLSIDPDHRSSADRALESEYFKTKPFACDPSNLPKYPPSKEIDAKMRDEAKRQQPMRAEKQER 539

  Fly   348 NDDISRDALK-------------SLIFEETLK-----------FKERQPDNAP 376
            .|.::|.:.:             |:..|:..|           |||.:..:.|
plant   540 QDSMTRISHERKFVPPVKANNSLSMTMEKQYKDLRSRNDSFKSFKEERTPHGP 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 117/389 (30%)
AT1G03740NP_171870.4 STKc_CDK9_like 213..497 CDD:270832 104/305 (34%)

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