DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and IBS1

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001321211.1 Gene:IBS1 / 838448 AraportID:AT1G18670 Length:720 Species:Arabidopsis thaliana


Alignment Length:391 Identity:123/391 - (31%)
Similarity:188/391 - (48%) Gaps:54/391 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NSSGSVVNGTGSTEVPQSNAEVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKI 69
            |.:|..::|.    ||      .|...||      ||..||:|.|..|..|.:|.|.:.||:||:
plant   114 NVAGEAIHGW----VP------FRSDAFE------KLEKIGQGTYSSVFRARETETGRIVALKKV 162

  Fly    70 --SPFEHQTYCQRTLREITILTRFKHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQ 132
              ..||.:: .:...|||.||.:..|.|||.:..|:   :......:::|...||.||..||.:.
plant   163 RFDNFEPES-VRFMAREILILRKLNHPNIIKLEGIV---TSKLSCSIHLVFEYMEHDLTGLLSSP 223

  Fly   133 RL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTG 195
            .:  :...|..::.|:|.||.:.|:..|:|||:|.||||:|....||:.|||||...:...:...
plant   224 DIDFTTPQIKCYMKQLLSGLDHCHARGVMHRDIKGSNLLVNNEGILKVADFGLANFCNASGNKQP 288

  Fly   196 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSP 260
             ||..|.|.|||.||::|.:..|..|:|:|||||:.||:|..:|:..|:..::||:.|..:.|||
plant   289 -LTSRVVTLWYRPPELLLGATEYGASVDLWSVGCVFAELLIGKPVLQGRTEVEQLHKIFKLCGSP 352

  Fly   261 SRDDLECIINEKARNYLESLPFKPNVPW-------AKLFPNADALALDLLGKMLTFNPHKRIPVE 318
            ..|      ..|......::.|||...:       .||...:|| .::|:..:|:..||||....
plant   353 PED------YWKKSKLPHAMLFKPQQHYDGCLRETLKLKGLSDA-DINLIETLLSIQPHKRGTAS 410

  Fly   319 EALAHPYLEQYY-------DPGDEPVAEVPFRINMEN-DDISRDALKSLIFEETLKFKERQPDNA 375
            .||    :.||:       ||...||......|:.:: :|.:|   |.:........:.|:|...
plant   411 TAL----VSQYFTSKPFACDPSSLPVYSPSKEIDAKHREDTTR---KKISGNGRRGTESRKPTRK 468

  Fly   376 P 376
            |
plant   469 P 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 114/352 (32%)
IBS1NP_001321211.1 STKc_CDK9_like 131..418 CDD:270832 105/308 (34%)

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