DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rl and ATMPK8

DIOPT Version :9

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001185027.1 Gene:ATMPK8 / 838394 AraportID:AT1G18150 Length:589 Species:Arabidopsis thaliana


Alignment Length:361 Identity:164/361 - (45%)
Similarity:231/361 - (63%) Gaps:20/361 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GSTEVPQSNAEVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKISP-FEHQTYC 78
            |.||......|..|.||.||         :|:|:||:|.||.|:.|.:|||||||:. |||.:..
plant    90 GETEFFTEYGEANRYQIQEV---------VGKGSYGVVASAVDSHTGERVAIKKINDVFEHVSDA 145

  Fly    79 QRTLREITILTRFKHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLK-TQRLSNDHICYF 142
            .|.||||.:|...:|.::::|:.|:...|..:.||:|:|..|||:||::::| ...|:.:|..:|
plant   146 TRILREIKLLRLLRHPDVVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFF 210

  Fly   143 LYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYR 207
            |||:||||||:|:|||.||||||.|:|.|..|.||||||||||::..:.....|.|:||||||||
plant   211 LYQLLRGLKYVHAANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPTAIFWTDYVATRWYR 275

  Fly   208 APEI--MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIIN 270
            |||:  ...|| ||.:|||||||||.||||..:|:||||:.:.||:.:...||:|..:.:..|.|
plant   276 APELCGSFFSK-YTPAIDIWSVGCIFAEMLLGKPLFPGKNVVHQLDLMTDFLGTPPPESISRIRN 339

  Fly   271 EKARNYLESLPFKPNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYL----EQYYD 331
            ||||.||.|:..|..||::..||.||.|||.||.::|.|:|..|...|:|||.||.    ....:
plant   340 EKARRYLSSMRKKQPVPFSHKFPKADPLALRLLERLLAFDPKDRASAEDALADPYFSGLSNSERE 404

  Fly   332 PGDEPVAEVPFRINMENDDISRDALKSLIFEETLKF 367
            |..:|::::.|  :.|...:.:|.::.||:.|.|::
plant   405 PTTQPISKLEF--DFERKKLVKDDVRELIYREILEY 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 156/341 (46%)
S_TKc 38..326 CDD:214567 145/291 (50%)
ATMPK8NP_001185027.1 STKc_TDY_MAPK 103..440 CDD:143364 160/348 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D741207at2759
OrthoFinder 1 1.000 - - FOG0000164
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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