DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and AT1G09600

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_172431.1 Gene:AT1G09600 / 837487 AraportID:AT1G09600 Length:714 Species:Arabidopsis thaliana


Alignment Length:354 Identity:123/354 - (34%)
Similarity:169/354 - (47%) Gaps:44/354 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SVVNGTGSTEV----PQSNA----EVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVA 65
            ||.||....:|    |...|    |.|.|.|......:.||..||:|.|..|..|.|..|||.||
plant   126 SVSNGERGAQVMAGWPSWLASVAGEAINGWIPRKADSFEKLEKIGQGTYSSVYKARDLETNQLVA 190

  Fly    66 IKKISPFEHQTYCQRTL-REITILTRFKHENIIDIRDIL--RVDSIDQMRDVYIVQCLMETDLYK 127
            :||:..........|.: |||.||.|..|.|::.:..::  ||..     .:|::...||.||..
plant   191 LKKVRFANMDPDSVRFMAREIIILRRLDHPNVMKLEGLITSRVSG-----SMYLIFEYMEHDLAG 250

  Fly   128 LLKTQ--RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPE 190
            |..|.  ..|...|..::.|:|.||::.||..|||||:|.|||||:...:|||.|||||......
plant   251 LASTPGINFSEAQIKCYMKQLLHGLEHCHSRGVLHRDIKGSNLLLDHNNNLKIGDFGLANFYQGH 315

  Fly   191 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 255
            ....  ||..|.|.|||.||::|.|..|..::|:||.||||||:.:.:||.||:..::||:.|..
plant   316 QKQP--LTSRVVTLWYRPPELLLGSTDYGVTVDLWSTGCILAELFTGKPIMPGRTEVEQLHKIFK 378

  Fly   256 VLGSPSRDDLECIINEKARNYLESLP----FKPNVPW----AKLFPNADALALDLLGKMLTFNPH 312
            :.||||.:..:          :..||    |||..|:    |:.|.:..:.||.|:..:|...|.
plant   379 LCGSPSEEYWK----------ISKLPHATIFKPQQPYKRCVAETFKSLPSSALALVEVLLAVEPD 433

  Fly   313 KRIPVEEALAHPYLEQYYDPGDEPVAEVP 341
            .|.....||...:..      ..|:|..|
plant   434 ARGTTASALESEFFT------TSPLASDP 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 112/323 (35%)
AT1G09600NP_172431.1 STKc_CDK9_like 163..447 CDD:270832 109/300 (36%)

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