DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and AT4G10010

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001328367.1 Gene:AT4G10010 / 826592 AraportID:AT4G10010 Length:649 Species:Arabidopsis thaliana


Alignment Length:409 Identity:131/409 - (32%)
Similarity:185/409 - (45%) Gaps:72/409 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GTGS------------TEVPQS-----------------NAEVIRGQIFEVGPRYIKLAYIGEGA 48
            |||.            |.||.|                 ..|.|:|.:......:.||..||:|.
plant   102 GTGGGGFNIFPPSNIPTSVPHSPEAELIAAGWPSWLTSVAGEAIKGWVPRRAESFEKLDKIGQGT 166

  Fly    49 YGMVVSADDTLTNQRVAIKKISPFEHQTYCQRTL-REITILTRFKHENIIDIRDILRVDSIDQMR 112
            |..|..|.|..|.:.||:||:..........|.: |||.||.:..|.|::.:..::   :.....
plant   167 YSSVYRARDLETGKMVAMKKVRFVNMDPESVRFMAREINILRKLDHPNVMKLECLV---TSKLSG 228

  Fly   113 DVYIVQCLMETDL--YKLLKTQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCD 175
            .:|:|...||.||  ..|....:.:...|..::.|:|.||::.||..:||||:|..|||:|....
plant   229 SLYLVFEYMEHDLSGLALRPGVKFTESQIKCYMKQLLSGLEHCHSRGILHRDIKGPNLLVNNDGV 293

  Fly   176 LKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 240
            |||.|||||.|..||.|..  ||..|.|.||||||::|.:..|...||:|||||||.|:...:||
plant   294 LKIGDFGLANIYHPEQDQP--LTSRVVTLWYRAPELLLGATEYGPGIDLWSVGCILTELFLGKPI 356

  Fly   241 FPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLE--SLP----FKPNVPWAKL----FPNA 295
            .||:..::|::.|....||||.|            |.:  .||    |||..|:.::    |.|.
plant   357 MPGRTEVEQMHKIFKFCGSPSDD------------YWQKTKLPLATSFKPQQPYKRVLLETFKNL 409

  Fly   296 DALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEP----VAEVP-FRINMENDDISRDA 355
            ...||.|:.|:|:..|.||......|:..:...      ||    |:.:| :..:.|.|...||.
plant   410 PPSALALVDKLLSLEPAKRGTASSTLSSKFFTM------EPLPCNVSSLPKYPPSKELDAKVRDE 468

  Fly   356 LKSLIFEETLKFKERQPDN 374
            .......||:  |.|.|::
plant   469 EARRKKSETV--KGRGPES 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 118/351 (34%)
AT4G10010NP_001328367.1 STKc_CDK9_like 156..440 CDD:270832 108/300 (36%)

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