DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and CDKB1;1

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_190986.1 Gene:CDKB1;1 / 824585 AraportID:AT3G54180 Length:309 Species:Arabidopsis thaliana


Alignment Length:309 Identity:108/309 - (34%)
Similarity:161/309 - (52%) Gaps:27/309 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKIS-PFEHQTYCQRTLREITILTRFKHENIIDIR 100
            :|.||..:|||.||.|..|.:..|.:.||:||.. ..:.:......||||::| :....:|..:|
plant     3 KYEKLEKVGEGTYGKVYKAMEKGTGKLVALKKTRLEMDEEGIPPTALREISLL-QMLSTSIYVVR 66

  Fly   101 DILRVDSIDQ--------MRDVYIVQCLMETDLYKLLKTQR-------LSNDHICYFLYQILRGL 150
             :|.|:.:.|        ..::|:|...::|||.|.:.:.|       |....|...::|:.:|:
plant    67 -LLCVEHVHQPSTKSQSTKSNLYLVFEYLDTDLKKFIDSYRKGPNPKPLEPFLIQKLMFQLCKGV 130

  Fly   151 KYIHSANVLHRDLKPSNLLLNKTCD-LKICDFGLAR-IADPEHDHTGFLTEYVATRWYRAPEIML 213
            .:.||..||||||||.||||.|..: |||.|.||.| ...|...:    |..:.|.||||||::|
plant   131 AHCHSHGVLHRDLKPQNLLLVKDKELLKIADLGLGRAFTVPLKSY----THEIVTLWYRAPEVLL 191

  Fly   214 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLE 278
            .|..|:..:|:||||||.|||:..:.:|||.....||.||..:||:|:......:  ...|::..
plant   192 GSTHYSTGVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGV--STLRDWHV 254

  Fly   279 SLPFKPNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLE 327
            ...::|. ......|:.....:|||.|||.:||.:||..:.||.|||.:
plant   255 YPKWEPQ-DLTLAVPSLSPQGVDLLTKMLKYNPAERISAKTALDHPYFD 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 108/309 (35%)
CDKB1;1NP_190986.1 Protein Kinases, catalytic domain 2..302 CDD:473864 108/307 (35%)

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