DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rl and mapk10

DIOPT Version :9

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001305177.1 Gene:mapk10 / 779515 XenbaseID:XB-GENE-1009840 Length:497 Species:Xenopus tropicalis


Alignment Length:405 Identity:153/405 - (37%)
Similarity:242/405 - (59%) Gaps:52/405 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EEFNSSGSVV-NGTGSTEVPQSNAEVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVA 65
            :.:|.|.|.| |...|.||..|...|::        ||..|..||.||.|:|.:|.|.:.::.||
 Frog    35 KHYNMSKSKVDNQFYSVEVGDSTFTVLK--------RYQNLKPIGSGAQGIVCAAYDAVLDRNVA 91

  Fly    66 IKKIS-PFEHQTYCQRTLREITILTRFKHENIIDIRDILRVD-SIDQMRDVYIVQCLMETDLYKL 128
            |||:| ||::||:.:|..||:.::....|:|||.:.::.... |:::.:|||:|..||:.:|.::
 Frog    92 IKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQV 156

  Fly   129 LKTQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDH 193
            ::.: |.::.:.|.|||:|.|:|::|||.::||||||||:::...|.|||.||||||.|.     
 Frog   157 IQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG----- 215

  Fly   194 TGF-LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVL 257
            |.| :|.||.||:|||||::| ..||.:::||||||||:.||:.::.:|||:.|:||.|.::..|
 Frog   216 TSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279

  Fly   258 GSPSRDDLECIINEKARNYLESLPFKPNVPWAKLFPN----AD--------ALALDLLGKMLTFN 310
            |:|..:.:: .:....|||:|:.|....:.:.||||:    ||        :.|.|||.|||..:
 Frog   280 GTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343

  Fly   311 PHKRIPVEEALAHPYLEQYYDP------------GDEPVA----EVP----FRINMENDDISRDA 355
            |.|||.|:|||.|||:..:|||            .::||.    |.|    :...::..:.:.:.
 Frog   344 PAKRISVDEALQHPYINVWYDPSEVEAGPLRDIWNEQPVKTKNNEKPPPQIYDKQLDEREHTIEE 408

  Fly   356 LKSLIFEETLKFKER 370
            .|.||::|.:.|:|:
 Frog   409 WKELIYKEVMNFEEK 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 141/368 (38%)
S_TKc 38..326 CDD:214567 128/302 (42%)
mapk10NP_001305177.1 STKc_JNK 63..417 CDD:270840 140/361 (39%)
S_TKc 64..359 CDD:214567 128/302 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D741207at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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