DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and mapk12b

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001038306.1 Gene:mapk12b / 557810 ZFINID:ZDB-GENE-041210-123 Length:364 Species:Danio rerio


Alignment Length:344 Identity:151/344 - (43%)
Similarity:214/344 - (62%) Gaps:9/344 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKI-SPFEHQTYCQRTLREITILTR 90
            |...:::|..||..|..||.||||.|.||.|..|..||||||: .||:.:.:.:|..||:.:|..
Zfish    14 INRTVWDVPERYRDLIQIGTGAYGTVCSAIDRKTGVRVAIKKLHRPFQSRLFAKRAYRELRLLKH 78

  Fly    91 FKHENIIDIRDILRVD-SIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIH 154
            .||||:|.:.|:...: .:|:..|.|:|...|.|||.||:|.:||..|.:.:.:|||||||||||
Zfish    79 MKHENVIGLLDVFTSEILLDRFHDFYLVMPFMGTDLGKLMKMERLCEDRVQFLVYQILRGLKYIH 143

  Fly   155 SANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT 219
            ||.::||||||.||.:|:.|:|||.||||||.||.|      :|.||.||||||||::||...|:
Zfish   144 SAGIIHRDLKPGNLAVNQNCELKILDFGLARQADSE------MTGYVVTRWYRAPEVILNWMHYS 202

  Fly   220 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKP 284
            :::||||||||:||||..|.:|.|..:||||..|:.:.|:|:.|.:..:.::.|:||:..||..|
Zfish   203 QTVDIWSVGCIMAEMLLGRTLFKGNDHLDQLREIMKITGTPAPDFITKLQSQDAKNYIRGLPKVP 267

  Fly   285 NVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRINMEND 349
            ......:|..|.:.|:..|..||..:|.||:...|||..|...::.:|.:|..| :|:..:|:|.
Zfish   268 KKDLNTIFFKASSEAVSALELMLVLDPDKRVSAAEALELPLFTEFREPEEETEA-LPYDHSMDNT 331

  Fly   350 DISRDALKSLIFEETLKFK 368
            ::..|..|...|.|.|.|:
Zfish   332 ELPLDQWKRHTFTEILSFQ 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 148/335 (44%)
mapk12bNP_001038306.1 Protein Kinases, catalytic domain 9..351 CDD:473864 151/344 (44%)

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