DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and cdk10

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001017622.2 Gene:cdk10 / 550285 ZFINID:ZDB-GENE-050417-94 Length:360 Species:Danio rerio


Alignment Length:312 Identity:108/312 - (34%)
Similarity:164/312 - (52%) Gaps:50/312 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KLAYIGEGAYGMVVSADDTLTNQRVAIKKIS--------PFEHQTYCQRTLREITILTRFKHENI 96
            |:..||||.||:|..|.||.||:.||:||:.        |..       :||||.:|.|.:|.||
Zfish    42 KINRIGEGTYGIVYRARDTRTNEIVALKKVRMDKEKDGIPIS-------SLREINLLIRLRHPNI 99

  Fly    97 IDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQR--LSNDHICYFLYQILRGLKYIHSANVL 159
            ::::::: |.|  .:..:::|....|.||..||:..:  .|...:...:.|:|:||.|:|...:|
Zfish   100 VELKEVV-VGS--HLESLFLVMSYCEQDLASLLENMQSPFSEAQVKCIVLQLLKGLAYLHHNFIL 161

  Fly   160 HRDLKPSNLLL-NKTCDLKICDFGLARI----ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT 219
            |||||.||||: :|.| :||.||||||:    ..|       :|..|.|.||||||::|.:|..|
Zfish   162 HRDLKVSNLLMTDKGC-VKIADFGLARVYGIPLQP-------MTPRVVTLWYRAPELLLGTKTQT 218

  Fly   220 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKP 284
            .::|:|:||||.||:|:::|:.||...:.||:.|:.:||:|         ||........||...
Zfish   219 TALDMWAVGCIFAELLAHKPLLPGASEIQQLDLIVQLLGTP---------NESIWPGFSRLPLVG 274

  Fly   285 NV-----PWAKL---FPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQ 328
            ..     |:..|   |.......|.||..:..:||.:|....:.|...|.::
Zfish   275 QYSLRKQPYNNLKNKFTWLSEAGLRLLNLLFMYNPQRRATAIDCLESSYFKE 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 108/312 (35%)
cdk10NP_001017622.2 STKc_CDK10 32..340 CDD:173742 108/312 (35%)

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