DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rl and Mapk9

DIOPT Version :9

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001257473.1 Gene:Mapk9 / 50658 RGDID:628847 Length:423 Species:Rattus norvegicus


Alignment Length:401 Identity:153/401 - (38%)
Similarity:241/401 - (60%) Gaps:49/401 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEFNSSGSVVNGTGSTEVPQSNAEVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVA 65
            |.:..|.|...    |.:|..|...|::        ||.:|..||.||.|:|.:|.||:....||
  Rat     1 MSDSKSDGQFY----SVQVADSTFTVLK--------RYQQLKPIGSGAQGIVCAAFDTVLGINVA 53

  Fly    66 IKKIS-PFEHQTYCQRTLREITILTRFKHENIIDIRDILRVD-SIDQMRDVYIVQCLMETDLYKL 128
            :||:| ||::||:.:|..||:.:|....|:|||.:.::.... ::::.:|||:|..||:.:|.::
  Rat    54 VKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV 118

  Fly   129 LKTQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDH 193
            :..: |.::.:.|.|||:|.|:|::|||.::||||||||:::...|.|||.||||||.|     .
  Rat   119 IHME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----C 177

  Fly   194 TGF-LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVL 257
            |.| :|.||.||:|||||::| ..||.:::||||||||:|||:.::.:|||:.|:||.|.::..|
  Rat   178 TNFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMAEMVLHKVLFPGRDYIDQWNKVIEQL 241

  Fly   258 GSPSRDDLECIINEKARNYLESLPFKPNVPWAKLFPN------------ADALALDLLGKMLTFN 310
            |:||.:.:: .:....|||:|:.|..|.:.:.:|||:            ..:.|.|||.|||..:
  Rat   242 GTPSAEFMK-KLQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVID 305

  Fly   311 PHKRIPVEEALAHPYLEQYYDPGDEPVAEVP----FRINMENDDISRDALKSLIFEETLKFKER- 370
            |.|||.|:|||.|||:..:|||.:   ||.|    :...:|..:.:.:..|.||::|.:.::|| 
  Rat   306 PDKRISVDEALRHPYITVWYDPAE---AEAPPPQIYDAQLEEREHAIEEWKELIYKEVMDWEERS 367

  Fly   371 ------QPDNA 375
                  ||.:|
  Rat   368 KNGVKDQPSDA 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 141/352 (40%)
S_TKc 38..326 CDD:214567 128/302 (42%)
Mapk9NP_001257473.1 STKc_JNK 25..360 CDD:270840 140/345 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D741207at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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