DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and cdk20

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_009302023.1 Gene:cdk20 / 494112 ZFINID:ZDB-GENE-041212-84 Length:359 Species:Danio rerio


Alignment Length:330 Identity:113/330 - (34%)
Similarity:182/330 - (55%) Gaps:56/330 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKIS--------PFEHQTYCQRTLREITILTRFKH 93
            :|..|..|||||:|:|..|....|.:.||:||::        |       .:.||||..|     
Zfish    18 QYSILGRIGEGAHGIVFKAKHIETGETVALKKVALRRLEDGIP-------NQALREIKAL----- 70

  Fly    94 ENIIDIRDILRVDSIDQMRDVY-------IVQCLMETDLYKLLK-TQR-LSNDHICYFLYQILRG 149
            :.|.|.:.:::      ::||:       :|...|.:||.:::: :|| |:...:..::..:|:|
Zfish    71 QEIEDNQYVVK------LKDVFPHGTGFVLVFEYMLSDLSEVIRNSQRPLTASQVKSYMMMLLKG 129

  Fly   150 LKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLN 214
            :.:.|..:::||||||:|||::.|..|||.||||||:...|.|.  ..:..||||||||||::..
Zfish   130 VAFCHENSIMHRDLKPANLLISSTGHLKIADFGLARLFSNEGDR--LYSHQVATRWYRAPELLYG 192

  Fly   215 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLES 279
            ::.|.:.:|:|:||||..|:|:|.|:|||::.::||..:|.|||:|         |:|....:..
Zfish   193 ARKYDEGVDLWAVGCIFGELLNNSPLFPGENDIEQLCCVLRVLGTP---------NQKVWPEITE 248

  Fly   280 LP------FK--PNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEP 336
            ||      ||  |.:|..::.|:....|:|||.|.|.:...:||...:||.|||.  :.||....
Zfish   249 LPDYNKITFKENPPIPLEEIVPDTSPQAVDLLKKFLVYPSKQRISARQALLHPYF--FTDPLPAH 311

  Fly   337 VAEVP 341
            .:|:|
Zfish   312 HSELP 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 113/330 (34%)
cdk20XP_009302023.1 STKc_CCRK 18..304 CDD:270826 109/316 (34%)

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