Protein Alignment rl and Cdk10

DIOPT Version :10

• Sequence 1: NP_001015122.1
• Gene: rl / 3354888
• FlyBaseID: FBgn0003256
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: XP_038953809.1
• Gene: Cdk10 / 361434
• RGDID: 1304851
• Length: 405
• Species: Rattus norvegicus
• Alignment Length: 376
• Identity: 115/376 - (30%)
• Similarity: 179/376 - (47%)
• Gaps: 95/376 - (25%)

  Fly    16 STEVPQSNAEVIRGQIFEVG-----PRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKIS----- 70
            |.::|     .:...:|::|     ..:.||..||||.||:|..|.||.|::.||:||:.
  Rat    27 SFQIP-----TLAASLFQLGRCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEK 86

  Fly    71 ---PFEHQTYCQRTLREITILTRFKHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKT- 131
               |..       :|||||:|.|.:|.||:::::::..:.::   .:::|....|.||..||:.
  Rat    87 DGIPIS-------SLREITLLLRLRHPNIVELKEVVVGNHLE---SIFLVMGYCEQDLASLLENM 141

  Fly   132 -----------------------------QRLSNDH-------ICYFLYQILRGLKYIHSANVLH 160
                                         ||:...|       :...|.|:||||:|:|.:.::|
  Rat   142 PTPFSEAQFCLSCAGHSHSHTLEVLVTSRQRVDALHPVSGPPQVKCILLQVLRGLQYLHRSFIIH 206

  Fly   161 RDLKPSNLLL-NKTCDLKICDFGLARI----ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 220
            ||||.||||: :|.| :|..||||||.    ..|       :|..|.|.||||||::|.:...|.
  Rat   207 RDLKVSNLLMTDKGC-VKTADFGLARAYGVPVKP-------MTPKVVTLWYRAPELLLGTTTQTT 263

  Fly   221 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPN 285
            |||:|:|||||||:|:::|:.||...:.|::.|:.:||:||         |........||....
  Rat   264 SIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPS---------ENIWPGFSKLPLAGQ 319

  Fly   286 V-----PWAKL---FPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQ 328
            .     |:..|   ||......|.||..:..::|.||....:.|...|.::
  Rat   320 YSLRKQPYNNLKHKFPWLSEAGLRLLNFLFMYDPKKRATAGDCLESSYFKE 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rl	NP_001015122.1	STKc_ERK1_2_like	32..366	CDD:270839	113/360 (31%)
Cdk10	XP_038953809.1	STKc_CDK10	41..384	CDD:173742	112/357 (31%)