DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and F09C12.2

DIOPT Version :9

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_872069.1 Gene:F09C12.2 / 353395 WormBaseID:WBGene00017277 Length:418 Species:Caenorhabditis elegans


Alignment Length:383 Identity:150/383 - (39%)
Similarity:215/383 - (56%) Gaps:29/383 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEFNSSGSVVNGTGSTEVPQSNAEVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVA 65
            :||.:.|.|..|.....|..|                |:....:|.||:|:|..|.|:..|::||
 Worm    23 LEEQSGSKSCSNDLFCLEATQ----------------YLAQENLGAGAFGVVCRAIDSKLNKQVA 71

  Fly    66 IKKIS-PFEHQTYCQRTLREITILTRFKHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLL 129
            ||||: .|::|:..:..||||.|.....|||||:..|:|..:| ...:|:|||..||||||..:|
 Worm    72 IKKITRVFKNQSTAKCALREIRITRELSHENIINSTDVLMRES-GSGQDIYIVMDLMETDLLSVL 135

  Fly   130 KT-QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARI------- 186
            |: |.|:..|..||.||||:||||:|||.::||||||:|||||:.|.|||.|||::|.       
 Worm   136 KSNQTLNEKHFQYFFYQILKGLKYLHSAGIIHRDLKPANLLLNEDCSLKIADFGMSRSGPSTKTT 200

  Fly   187 --ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 249
              ..|....:|.|::||:|.|||||||:|:...|...:||||.||||||||..||||.|.....|
 Worm   201 PNTSPNAHISGDLSQYVSTLWYRAPEILLSMGEYDTQVDIWSAGCILAEMLLLRPIFTGTDSYSQ 265

  Fly   250 LNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNVPWAKLFPNADALALDLLGKMLTFNPHKR 314
            :..::..||:|....:..|.:...|:|:.|...|..:|:..:||||...|.:::.|||..:|.||
 Worm   266 IQLLIEYLGTPDEQVIRRIKSPSIRDYISSFGPKTPLPFTAMFPNASIEARNIVSKMLQISPWKR 330

  Fly   315 IPVEEALAHPYLEQYYDPGDEPVAEVPFRIN-MENDDISRDALKSLIFEETLKFKERQ 371
            ...|:.|..|:::.::...:||......|.| :|......|.:...:.||...|:::|
 Worm   331 FSAEQLLEEPFVKHWHTVKNEPSCPNHIRQNLLETAKYEGDVIIKGLQEEVRIFEKKQ 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 141/345 (41%)
S_TKc 38..326 CDD:214567 133/298 (45%)
F09C12.2NP_872069.1 STKc_MAPK 44..355 CDD:270828 135/311 (43%)
S_TKc 44..342 CDD:214567 133/298 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D309855at33208
OrthoFinder 1 1.000 - - FOG0000164
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100339
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

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