Protein Alignment rl and cdk9

DIOPT Version :10

• Sequence 1: NP_001015122.1
• Gene: rl / 3354888
• FlyBaseID: FBgn0003256
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: XP_068071880.1
• Gene: cdk9 / 321602
• ZFINID: ZDB-GENE-030131-321
• Length: 395
• Species: Danio rerio
• Alignment Length: 325
• Identity: 109/325 - (33%)
• Similarity: 161/325 - (49%)
• Gaps: 49/325 - (15%)

  Fly    37 RYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKI-SPFEHQTYCQRTLREITILTRFKHENIIDIR 100
            :|.|||.||:|.:|.|..|....|.::||:||: ...|.:.:....||||.||...||||::::.
Zfish    39 KYEKLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 103

  Fly   101 DILR----VDSIDQMR-DVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQI-------LRGLKYI 153
            :|.|    ....::.: .:|:|....|.||..|     |||.::.:.|.:|       |.||.||
Zfish   104 EICRTKGEATQFNRYKGSIYLVFDFCEHDLAGL-----LSNANVKFTLAEIKRVMQMLLNGLYYI 163

  Fly   154 HSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTG-FLTEYVATRWYRAPEIMLNSKG 217
            |...:||||:|.:|:|:.:...||:.||||||......:..| ..|..|.|.|||.||::|..:.
Zfish   164 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERD 228

  Fly   218 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGS------PSRD---------DLEC 267
            |...||:|..|||:|||.:..||..|.....||..|..:.||      |..|         :|..
Zfish   229 YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKKYELYQKMELPK 293

  Fly   268 IINEKARNYLESLPFKPNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDP 332
            ....|.::.|::        :.|     |..||||:.|:|..:|.:||..::||.|.:.  :.||
Zfish   294 GQKRKVKDRLKA--------YVK-----DPYALDLIDKLLVLDPAQRIDSDDALNHDFF--WSDP 343

  Fly   333  332
            Zfish   344  343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rl	NP_001015122.1	STKc_ERK1_2_like	32..366	CDD:270839	109/325 (34%)
cdk9	XP_068071880.1	STKc_CDK9	27..339	CDD:270848	107/317 (34%)