DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rl and sty1

DIOPT Version :9

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_592843.1 Gene:sty1 / 2541652 PomBaseID:SPAC24B11.06c Length:349 Species:Schizosaccharomyces pombe


Alignment Length:349 Identity:171/349 - (48%)
Similarity:231/349 - (66%) Gaps:15/349 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AEVIRGQI----FEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKI-SPFEHQTYCQRTLR 83
            ||.||.||    ||:..||..|..||.||:|:|.||.|.||...||:||| .||......:||.|
pombe     2 AEFIRTQIFGTCFEITTRYSDLQPIGMGAFGLVCSAKDQLTGMNVAVKKIMKPFSTPVLAKRTYR 66

  Fly    84 EITILTRFKHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILR 148
            |:.:|...:|||||.:.||.    |....|:|.|..|:.|||::||.::.|....|.||||||||
pombe    67 ELKLLKHLRHENIISLSDIF----ISPFEDIYFVTELLGTDLHRLLTSRPLETQFIQYFLYQILR 127

  Fly   149 GLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIML 213
            |||::|||.|:||||||||:|:|:.|||||||||||||.||:      :|.||:||:||||||||
pombe   128 GLKFVHSAGVIHRDLKPSNILINENCDLKICDFGLARIQDPQ------MTGYVSTRYYRAPEIML 186

  Fly   214 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLE 278
            ..:.|...:||||.|||.|||:..:|:|||:.:::|.:.|..:||:|..:.:|.|.::....:::
pombe   187 TWQKYNVEVDIWSAGCIFAEMIEGKPLFPGRDHVNQFSIITELLGTPPMEVIETICSKNTLRFVQ 251

  Fly   279 SLPFKPNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFR 343
            |||.|..||:|:.|.|||..|:|||.|||.|:|.|||...:||||.||..|:||.|||||:..|.
pombe   252 SLPQKEKVPFAEKFKNADPDAIDLLEKMLVFDPRKRISAADALAHNYLAPYHDPTDEPVADEVFD 316

  Fly   344 INMENDDISRDALKSLIFEETLKF 367
            .:.:::|:..:..|.:::.|.|.|
pombe   317 WSFQDNDLPVETWKVMMYSEVLSF 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 163/334 (49%)
S_TKc 38..326 CDD:214567 146/288 (51%)
sty1NP_592843.1 STKc_Sty1_Hog1 9..336 CDD:270843 163/336 (49%)
S_TKc 20..299 CDD:214567 146/288 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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