DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and pmk-1

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_501365.1 Gene:pmk-1 / 191743 WormBaseID:WBGene00004055 Length:377 Species:Caenorhabditis elegans


Alignment Length:338 Identity:163/338 - (48%)
Similarity:227/338 - (67%) Gaps:17/338 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 YIKLAYIGEGAYGMVVSADDTLTNQRVAIKKIS-PFEHQTYCQRTLREITILTRFKHENIIDIRD 101
            ||.|..||.||||.|.:|:.|.:..||||||.: ||:...:.:||.||:.:|....||||||:.|
 Worm    35 YINLTPIGTGAYGTVCAAECTRSGTRVAIKKFNRPFQSIIHARRTYRELRLLRCMCHENIIDLLD 99

  Fly   102 ILRV-DSIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 165
            :... ::::.:.|||.|..||..||..:||.|||::|||.:.:|||||||||||||:::||||||
 Worm   100 VFTPNENVNDIEDVYFVSMLMGADLSNILKIQRLNDDHIQFLVYQILRGLKYIHSADIIHRDLKP 164

  Fly   166 SNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 230
            ||:.:|:.|:|||.||||||..|.|      :|.|||||||||||||||...||:::|:||||||
 Worm   165 SNIAVNEDCELKILDFGLARQTDSE------MTGYVATRWYRAPEIMLNWMHYTQTVDVWSVGCI 223

  Fly   231 LAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNVPWAKLFPNA 295
            |||:::.:.:|||..::|||..|:.|.|:|..:.|:.|.:|:||||:.:||......:.:||..|
 Worm   224 LAELITGKTLFPGSDHIDQLTRIMSVTGTPDEEFLKKISSEEARNYIRNLPKMTRRDFKRLFAQA 288

  Fly   296 DALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRINME-NDDISRDAL--- 356
            ...|:|||.|||..:|.:|...:||:.|.||..|:|..|||:||     .|: |||:..|.:   
 Worm   289 TPQAIDLLEKMLHLDPDRRPTAKEAMEHEYLAAYHDETDEPIAE-----EMDLNDDVRADTIDEW 348

  Fly   357 KSLIFEETLKFKE 369
            |.:|:||...|::
 Worm   349 KKIIWEEISDFQK 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 162/333 (49%)
pmk-1NP_501365.1 STKc_p38 19..361 CDD:143356 163/336 (49%)

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