DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and pmk-1

DIOPT Version :9

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_501365.1 Gene:pmk-1 / 191743 WormBaseID:WBGene00004055 Length:377 Species:Caenorhabditis elegans


Alignment Length:338 Identity:163/338 - (48%)
Similarity:227/338 - (67%) Gaps:17/338 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 YIKLAYIGEGAYGMVVSADDTLTNQRVAIKKIS-PFEHQTYCQRTLREITILTRFKHENIIDIRD 101
            ||.|..||.||||.|.:|:.|.:..||||||.: ||:...:.:||.||:.:|....||||||:.|
 Worm    35 YINLTPIGTGAYGTVCAAECTRSGTRVAIKKFNRPFQSIIHARRTYRELRLLRCMCHENIIDLLD 99

  Fly   102 ILRV-DSIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 165
            :... ::::.:.|||.|..||..||..:||.|||::|||.:.:|||||||||||||:::||||||
 Worm   100 VFTPNENVNDIEDVYFVSMLMGADLSNILKIQRLNDDHIQFLVYQILRGLKYIHSADIIHRDLKP 164

  Fly   166 SNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 230
            ||:.:|:.|:|||.||||||..|.|      :|.|||||||||||||||...||:::|:||||||
 Worm   165 SNIAVNEDCELKILDFGLARQTDSE------MTGYVATRWYRAPEIMLNWMHYTQTVDVWSVGCI 223

  Fly   231 LAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNVPWAKLFPNA 295
            |||:::.:.:|||..::|||..|:.|.|:|..:.|:.|.:|:||||:.:||......:.:||..|
 Worm   224 LAELITGKTLFPGSDHIDQLTRIMSVTGTPDEEFLKKISSEEARNYIRNLPKMTRRDFKRLFAQA 288

  Fly   296 DALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRINME-NDDISRDAL--- 356
            ...|:|||.|||..:|.:|...:||:.|.||..|:|..|||:||     .|: |||:..|.:   
 Worm   289 TPQAIDLLEKMLHLDPDRRPTAKEAMEHEYLAAYHDETDEPIAE-----EMDLNDDVRADTIDEW 348

  Fly   357 KSLIFEETLKFKE 369
            |.:|:||...|::
 Worm   349 KKIIWEEISDFQK 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 162/333 (49%)
S_TKc 38..326 CDD:214567 144/289 (50%)
pmk-1NP_501365.1 STKc_p38 19..361 CDD:143356 163/336 (49%)
S_TKc 35..319 CDD:214567 144/289 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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