DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and kgb-2

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_500384.2 Gene:kgb-2 / 191169 WormBaseID:WBGene00002188 Length:332 Species:Caenorhabditis elegans


Alignment Length:318 Identity:127/318 - (39%)
Similarity:184/318 - (57%) Gaps:32/318 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKI-SPFEHQTYCQRTLREITILTRFK 92
            |..|.:..||:.|.::..||.|:||.|||.:|.|||||||: .||......:|..||..:||..|
 Worm    20 GITFTIPTRYVNLKFLNVGAQGIVVMADDLVTTQRVAIKKMQQPFLLTMSARRAYREFILLTTLK 84

  Fly    93 HENIIDIRDILRVD-SIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIHSA 156
            |.|||.:.:....| |:...::||:|...|..:|::::...||.::.:.:.:||.|..:|::|:.
 Worm    85 HPNIIRLLNAFTPDTSLSSFQEVYLVMEFMTHNLHEVIHRLRLDHETLSFLVYQSLCAIKHLHNL 149

  Fly   157 NVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 221
            ..:||||||||:::|:.|.||:.||||||..:.:..    :::||.||:|||||::| ...|::.
 Worm   150 GFIHRDLKPSNIVVNERCVLKVLDFGLARRRNVDMR----MSDYVGTRYYRAPEVIL-GLNYSEK 209

  Fly   222 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDD-----LECIINEKARNYLESLP 281
            :||||||||||||:::..:||||...||...|..||.:|  ||     ||.|    ...|:.|||
 Worm   210 VDIWSVGCILAEMINHTVLFPGKDIRDQWTQISSVLRTP--DDHFINQLEPI----GAVYVRSLP 268

  Fly   282 ------FKPNVPWAKLFPNAD--------ALALDLLGKMLTFNPHKRIPVEEALAHPY 325
                  |...||.:...|..:        .:|.|||..||..||.:|..||:||.|||
 Worm   269 QHLARAFNEIVPDSNFLPETENPKDHLTLHMARDLLFNMLKINPEERYSVEDALNHPY 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 126/315 (40%)
kgb-2NP_500384.2 Protein Kinases, catalytic domain 28..329 CDD:473864 125/310 (40%)

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