DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and pmk-2

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_741457.2 Gene:pmk-2 / 177611 WormBaseID:WBGene00004056 Length:402 Species:Caenorhabditis elegans


Alignment Length:261 Identity:51/261 - (19%)
Similarity:95/261 - (36%) Gaps:68/261 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KARKTRYNTSITMPSVLPSPDLQMLKLVSPELEKIISTNATLPTPTPSAIIFPPSATSE-QQQFA 133
            |..|....||:.......|..|.|.|..|.|.:        :..|:||....||:.::| :..|:
 Worm   696 KEIKLASKTSLLASKKKMSNVLTMWKQRSHETQ--------IQRPSPSLGDNPPTVSAEARSSFS 752

  Fly   134 KGFEDALLSIHKKDTTSKLNTNV--PTNTTSNNNNNNSSTSNNNNNNSANSVTLVG--------- 187
            .|           .:..||.::|  ....:::|:..::.|:..::::|....||:|         
 Worm   753 TG-----------QSMGKLKSDVIIAKERSTSNHGVSALTTAESSSSSTTGGTLMGVMRGSFGGT 806

  Fly   188 -----PSAIERLCPTTAAVAPVTAIATAN-----TATGMAAAT-------------------VGH 223
                 .||..::.|...:.:|.:...:.:     :.|..|..|                   .|.
 Worm   807 LGGASSSASVQMPPILPSASPASVSVSGSGRRRFSETPTAGPTHREQPQTSYRDRAAERRNLYGS 871

  Fly   224 HTGMSGGEITYTNLDYPGVVKEEPQPTT------SAASNQSPPVSPIDMESQERIKLERKRLRNR 282
            .|. ||.::..::.|..|:.|....||.      ......|..||..|:.::|| .::...:.||
 Worm   872 STS-SGNDVIDSSEDLMGLRKGSSDPTPFPPGVGGRGITTSTEVSSFDVITEER-AIDESNVGNR 934

  Fly   283 V 283
            :
 Worm   935 M 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 51/261 (20%)
pmk-2NP_741457.2 STKc_p38 33..381 CDD:143356
Blue background indicates that the domain is not in the aligned region.

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