DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and pmk-3

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001379550.1 Gene:pmk-3 / 177610 WormBaseID:WBGene00004057 Length:474 Species:Caenorhabditis elegans


Alignment Length:368 Identity:138/368 - (37%)
Similarity:200/368 - (54%) Gaps:52/368 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FEVGPRYIKLAYIGEGAYGMVVSAD----DTLTNQRVAIKKI-SPFEHQTYCQRTLREITILTRF 91
            ::|.|..|:  |:|.|::|.|:...    |.| .:.|||||: .||....:.:|..||..:|...
 Worm   114 YDVEPNSIE--YLGGGSFGNVIKTSAVCRDGL-RRYVAIKKMREPFFDPHHARRIFRETKLLQLM 175

  Fly    92 KHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQR------LSNDHICYFLYQILRGL 150
            :|:|||...||...|..:..||||:|.......||::||.||      |:::||.:.:|||:|.|
 Worm   176 RHDNIICALDIYTPDEENDFRDVYVVTEFAGRSLYQILKQQRDYGRRVLTDEHIKFIIYQIIRAL 240

  Fly   151 KYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIML-N 214
            |||||||::||||||.||.|....||.|.||||||..:.:...   ||:||.|||||:||::. .
 Worm   241 KYIHSANIIHRDLKPGNLALTDDSDLMILDFGLARSLEKKDTS---LTQYVQTRWYRSPEVIYWK 302

  Fly   215 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINE-------- 271
            ...||...|:||:|||.||:|:..|:|||.....|...|..:.|||..:.|..|.|:        
 Worm   303 IDSYTNLADMWSLGCIAAELLTGEPLFPGDEPNAQYQRITQLCGSPDEELLTKIENDNSSAIKAV 367

  Fly   272 -------KARNYLESLPFKPNVPWAKLF----PNADALALDLLGKMLTFNPHKRIPVEEALAHPY 325
                   |.||:.:            :|    |:.|  .:|||.|:|..:|.|||.||||:.|||
 Worm   368 IQSYTTHKRRNFRD------------VFSAHNPSED--FIDLLEKLLVLDPEKRITVEEAIQHPY 418

  Fly   326 LEQYYDPGDEPVAEVPFRINMENDDISRDALKSLIFEETLKFK 368
            |.::..|.|||.|:..|.:: ::...:|...:..:::|.:.:|
 Worm   419 LAEFSLPEDEPRADHIFDLD-DSQARTRFEWRDAVWKEIMNYK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 137/364 (38%)
pmk-3NP_001379550.1 STKc_p38 102..461 CDD:143356 138/368 (38%)

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