DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and kgb-1

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_499922.1 Gene:kgb-1 / 176866 WormBaseID:WBGene00002187 Length:390 Species:Caenorhabditis elegans


Alignment Length:355 Identity:137/355 - (38%)
Similarity:206/355 - (58%) Gaps:22/355 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKI-SPFEHQTYCQRTLREITILTRFKHEN 95
            |.:..||:.|:::..||.|.||.|||.:|.|||||||: .||......:|..||..:||..||.|
 Worm    32 FTIPTRYVNLSFLNAGAQGTVVMADDLVTTQRVAIKKMQQPFVMTMSAKRAYREFILLTTIKHPN 96

  Fly    96 IIDIRDILRVD-SIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIHSANVL 159
            ||.:.:....| |:...|:||:|..||..:|::::...||.:..:.:|:||.|..:|::|::.|:
 Worm    97 IIRLLNAFTPDTSLSTFREVYLVMELMTHNLHEVIHRLRLDHKTLSFFVYQSLCAIKHLHNSGVI 161

  Fly   160 HRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 224
            ||||||||:::|..|.||:.||||||  ....|.:..:::||.||:|||||::|... |::.:||
 Worm   162 HRDLKPSNIVVNDRCVLKVLDFGLAR--KKNVDTSMRMSDYVVTRYYRAPEVILGLP-YSEKVDI 223

  Fly   225 WSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLP------FK 283
            ||||||.|||:::..:||||..:||...|..|||:|. |.....:.:.|..|:.|||      |.
 Worm   224 WSVGCIFAEMINHTVLFPGKDRIDQWTKIYSVLGTPD-DHFISQLGQSAAMYVRSLPRHQARAFS 287

  Fly   284 PNVPWAKLFPNAD--------ALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYY--DPGDEPVA 338
            ..||.....|..:        .:|.|||..||..||.:|..||:||.|||::.::  |..:.|.:
 Worm   288 EIVPDTNFLPETENPRVHLTPHVARDLLFNMLKINPEERYSVEDALNHPYVKLWFKDDEVNAPAS 352

  Fly   339 EVPFRINMENDDISRDALKSLIFEETLKFK 368
            |..:...::..|.:....|.|||.|..:::
 Worm   353 ENRYDQEIDFADKTLIEWKELIFNEVQRYQ 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 137/351 (39%)
kgb-1NP_499922.1 Protein Kinases, catalytic domain 37..378 CDD:473864 135/344 (39%)

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