Protein Alignment rl and cdk-7

DIOPT Version :10

• Sequence 1: NP_001015122.1
• Gene: rl / 3354888
• FlyBaseID: FBgn0003256
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001370652.1
• Gene: cdk-7 / 171784
• WormBaseID: WBGene00000408
• Length: 330
• Species: Caenorhabditis elegans
• Alignment Length: 344
• Identity: 126/344 - (36%)
• Similarity: 179/344 - (52%)
• Gaps: 35/344 - (10%)

  Fly    37 RYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKI---SPFEHQTYCQRT-LREITILTRFKHENII 97
            ||..:.::|||.:..|..|.|..:.:.||||||   |..|.:....|| :|||.:|....|:|||
 Worm     4 RYDTIKHLGEGQFANVYLAQDLESGECVAIKKIKLGSREEAKDGINRTAIREIKLLKEIHHDNII 68

  Fly    98 DIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQR--LSNDHICYFLYQILRGLKYIHSANVLH 160
            .:||:     |.....:.:|...|:|||..::|.:.  |...||.....|:|.||:::|...:||
 Worm    69 GLRDV-----IGHRTSIQLVFDFMDTDLEHVIKDKEIILMPAHIKNITMQMLLGLEFLHVHWILH 128

  Fly   161 RDLKPSNLLLNKTCDLKICDFGLAR-IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 224
            |||||:|||:||...:|:.|||||| ...|..::    |..|.||||||||::..::.|...|||
 Worm   129 RDLKPNNLLMNKMGRVKLTDFGLARFFGSPNRNY----THQVVTRWYRAPELLFGARSYGVGIDI 189

  Fly   225 WSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPF---KPNV 286
            ||||||:||:|...|||||:..:|||..|..:||.|:        .|...|..|...:   ||..
 Worm   190 WSVGCIIAELLLRNPIFPGESDIDQLVKIFNILGCPT--------PETWPNMTEMNSYVIIKPQT 246

  Fly   287 PWAKL---FPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLE-QYYDPGDE----PVAEVPFR 343
            .:..|   |..|....|||:..|.||:|.||:...::|...|.. |.:...||    |..:.|.:
 Worm   247 EYMALNYYFSAAPQDLLDLMAGMWTFDPIKRLTCTQSLQMEYFRTQPFCCLDEELPLPKKQQPQK 311

  Fly   344 INMENDDISRDALKSLIFE 362
            .:...||.....::.|.|:
 Worm   312 RSRRLDDDGTRPVRRLNFD 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rl	NP_001015122.1	STKc_ERK1_2_like	32..366	CDD:270839	126/344 (37%)
cdk-7	NP_001370652.1	STKc_CDK7	4..302	CDD:270833	120/314 (38%)