Protein Alignment rl and Cdk7

DIOPT Version :10

• Sequence 1: NP_001015122.1
• Gene: rl / 3354888
• FlyBaseID: FBgn0003256
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001385585.1
• Gene: Cdk7 / 171150
• RGDID: 621124
• Length: 346
• Species: Rattus norvegicus
• Alignment Length: 322
• Identity: 123/322 - (38%)
• Similarity: 171/322 - (53%)
• Gaps: 41/322 - (12%)

  Fly    37 RYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKISPFEHQTYCQ----RT-LREITILTRFKHENI 96
            ||.||.::|||.:..|..|.|..|||.||||||. ..|::..:    || ||||.:|....|.||
  Rat    11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIK-LGHRSEAKDGINRTALREIKLLQELSHPNI 74

  Fly    97 IDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQR--LSNDHICYFLYQILRGLKYIHSANVL 159
            |.:     :|:.....::.:|...|||||..::|...  |:..||..::...|:||:|:|...:|
  Rat    75 IGL-----LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 134

  Fly   160 HRDLKPSNLLLNKTCDLKICDFGLAR-IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 223
            ||||||:||||::...||:.|||||: ...|...:    |..|.||||||||::..::.|...:|
  Rat   135 HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY----THQVVTRWYRAPELLFGARMYGVGVD 195

  Fly   224 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRD---DLECIINEKARNYLESLP---- 281
            :|:|||||||:|...|..||...||||..|...||:|:.:   |: |           |||
  Rat   196 MWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM-C-----------SLPDYVT 248

  Fly   282 FK--PNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVP 341
            ||  |.:|...:|..|....|:|:..:..|||..||...:||...|...  .||..|..::|
  Rat   249 FKSFPGIPLQHIFIAAGDDLLELIQGLFLFNPCTRITASQALRTKYFSN--RPGPTPGCQLP 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rl	NP_001015122.1	STKc_ERK1_2_like	32..366	CDD:270839	123/322 (38%)
Cdk7	NP_001385585.1	STKc_CDK7	11..308	CDD:270833	122/320 (38%)