DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and CkIIalpha

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_315576.4 Gene:CkIIalpha / 1276254 VectorBaseID:AGAMI1_014137 Length:343 Species:Anopheles gambiae


Alignment Length:297 Identity:90/297 - (30%)
Similarity:155/297 - (52%) Gaps:33/297 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 IGEGAYGMVVSADDTLTNQRVAIKKISPFEHQTYCQRTLREITILTRFK-HENIIDIRDILRVDS 107
            :|.|.|..|..|....:|::..:|.:.|.:.    ::..|||.||...: ..|||.:..::: |.
Mosquito    43 LGRGKYSEVFEAIKMTSNEKCVVKILKPVKK----KKIKREIKILENLRGGTNIITLLAVVK-DP 102

  Fly   108 IDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL-N 171
            :.: ....|.:.:..||..:|.:|  ||:..|.|:||::|:.|.|.||..::|||:||.|::: :
Mosquito   103 VSR-TPALIFEHVNNTDFKQLYQT--LSDYDIRYYLYELLKALDYCHSLGIMHRDVKPHNVMIDH 164

  Fly   172 KTCDLKICDFGLARIADPEHDHTGFLTEY---VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 233
            :...|::.|:|||     |..|.|  .||   ||:|:::.||::::.:.|..|:|:||:||:||.
Mosquito   165 ENRKLRLIDWGLA-----EFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 222

  Fly   234 MLSNR-PIFPGKHYLDQLNHILGVLGSPSRDDLECIIN----EKARNYLESLPFKPNVPWAKLFP 293
            |:..: |.|.|....|||..|..|||:   :||...::    |....:.:.|.......|.:...
Mosquito   223 MIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLFAYLDKYNIELDPRFNDILSRHSRKRWERFVH 284

  Fly   294 N-----ADALALDLLGKMLTFNPHKRIPVEEALAHPY 325
            :     .....||.|.|:|.::..:|:...||:.|||
Mosquito   285 SENQHLVSPEGLDFLDKLLRYDHFERLTAREAMEHPY 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 90/297 (30%)
CkIIalphaXP_315576.4 STKc_CK2_alpha 18..322 CDD:271034 90/297 (30%)

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