DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and LOC1275940

DIOPT Version :10

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_315230.4 Gene:LOC1275940 / 1275940 VectorBaseID:AGAMI1_006438 Length:305 Species:Anopheles gambiae


Alignment Length:303 Identity:108/303 - (35%)
Similarity:164/303 - (54%) Gaps:28/303 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RYIKLAYIGEGAYGMVVSADDTLTNQR-VAIKKIS-PFEHQTYCQRTLREITILTRFKHENIIDI 99
            ||..|..||||.:|:||.|.|..::.: |||||:| ..:.......|:|||..|...:.:|::::
Mosquito     8 RYQLLGRIGEGVHGVVVKARDLQSDDKMVAIKKLSLRTKFGVISLNTVREIRALQHCRCDNVLEL 72

  Fly   100 RDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQR--LSNDHICYFLYQILRGLKYIHSANVLHRD 162
                 :|....:..:.:|...|...||..||.:.  ||...:..:...:|:||.|:|...::|||
Mosquito    73 -----LDMYPDLAGISLVFEYMPHTLYSKLKDEENPLSRATVRRYTGMLLKGLAYLHGLRLMHRD 132

  Fly   163 LKPSNLLLNKTCDLKICDFGLARI-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 226
            :||:|||:::...|||.||||||| .:|:...:...:..|||||||||||:...:.|..|||:|:
Mosquito   133 IKPANLLIDRHDVLKIADFGLARIYTEPQQQSSKVYSPQVATRWYRAPEILWGCQRYGPSIDLWA 197

  Fly   227 VGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLP--FKPNVP-- 287
            .|.:.||||...|:|.|...::||..::..||:|         |:|....:.|||  .|...|  
Mosquito   198 SGAVCAEMLRGVPLFAGATDIEQLALVVRTLGTP---------NQKDWPEVRSLPDYNKIRFPNS 253

  Fly   288 ----WAKLFPNADAL-ALDLLGKMLTFNPHKRIPVEEALAHPY 325
                |..:||:.... .:.|:..::.:||.||:..||||.|||
Mosquito   254 RGERWEDIFPSCTTRDEISLVDGLVRYNPAKRLTAEEALLHPY 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 108/303 (36%)
LOC1275940XP_315230.4 None

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