DRSC/TRiP Functional Genomics Resources

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Protein Alignment rl and Mapk1

DIOPT Version :9

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_446294.1 Gene:Mapk1 / 116590 RGDID:70500 Length:358 Species:Rattus norvegicus


Alignment Length:344 Identity:283/344 - (82%)
Similarity:309/344 - (89%) Gaps:0/344 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKISPFEHQTYCQRTLREITILT 89
            |::|||:|:|||||..|:||||||||||.||.|.|...|||||||||||||||||||||||.||.
  Rat    10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 74

  Fly    90 RFKHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIH 154
            ||:|||||.|.||:|..:|:||:||||||.|||||||||||||.|||||||||||||||||||||
  Rat    75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139

  Fly   155 SANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT 219
            |||||||||||||||||.|||||||||||||:|||:|||||||||||||||||||||||||||||
  Rat   140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204

  Fly   220 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKP 284
            ||||||||||||||||||||||||||||||||||||:|||||::||.||||.||||||.|||.|.
  Rat   205 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKN 269

  Fly   285 NVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRINMEND 349
            .|||.:||||||:.|||||.|||||||||||.||:|||||||||||||.|||:||.||:.:||.|
  Rat   270 KVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELD 334

  Fly   350 DISRDALKSLIFEETLKFK 368
            |:.::.||.||||||.:|:
  Rat   335 DLPKEKLKELIFEETARFQ 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 278/333 (83%)
S_TKc 38..326 CDD:214567 246/287 (86%)
Mapk1NP_446294.1 STKc_ERK1_2_like 17..351 CDD:270839 278/333 (83%)
Inhibitor-binding 103..109 4/5 (80%)
TXY 183..185 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344236
Domainoid 1 1.000 509 1.000 Domainoid score I311
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37670
Inparanoid 1 1.050 592 1.000 Inparanoid score I944
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D309855at33208
OrthoFinder 1 1.000 - - FOG0000164
OrthoInspector 1 1.000 - - otm45936
orthoMCL 1 0.900 - - OOG6_100339
Panther 1 1.100 - - LDO PTHR24055
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X259
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

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