DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rl and mapk6

DIOPT Version :9

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_002936385.1 Gene:mapk6 / 100494114 XenbaseID:XB-GENE-478419 Length:720 Species:Xenopus tropicalis


Alignment Length:331 Identity:151/331 - (45%)
Similarity:212/331 - (64%) Gaps:14/331 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKISPFEHQTYCQRTLREITILTRFKHENI 96
            |::|.||:.|..:|.|..|:|.||.|...::|||:|||...:.|: .:..||||.|:.|..|:||
 Frog    14 FDLGSRYMDLKPLGYGGNGLVFSAVDNDCDKRVAVKKIVLTDPQS-VKHALREIKIIRRLDHDNI 77

  Fly    97 IDIRDIL---------RVDSIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKY 152
            :.:.:||         .|.|:.::..|||||..|||||.|||:...|..:|...|:||:||||||
 Frog    78 VKVFEILGPNGRQLTDDVSSLTELNCVYIVQDYMETDLAKLLEQGPLREEHARLFMYQLLRGLKY 142

  Fly   153 IHSANVLHRDLKPSNLLLNKTCDL--KICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNS 215
            |||||||||||||:||.:| |.||  ||.|||||||.||.:.|.|.|:|.:.|:|||:|.::|:.
 Frog   143 IHSANVLHRDLKPANLFIN-TEDLVVKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP 206

  Fly   216 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESL 280
            ..|||:||:|:.|||.||||:.:.:|.|.|.|:|:..||..:.....:|.:.::| ....|:::.
 Frog   207 NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLN-VIPVYIKND 270

  Fly   281 PFKPNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRIN 345
            ..:|:.|..:|.|...:.|||.|.::|||:|..|:..||||:|||:..|..|.|||::..||.|.
 Frog   271 MSEPHKPLTQLLPGISSEALDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPISSHPFHIE 335

  Fly   346 MENDDI 351
            .|.|||
 Frog   336 DEVDDI 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 151/331 (46%)
S_TKc 38..326 CDD:214567 135/298 (45%)
mapk6XP_002936385.1 STKc_MAPK4_6 14..355 CDD:143359 151/331 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D741207at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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