DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rl and mapk9

DIOPT Version :9

Sequence 1:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_001919688.1 Gene:mapk9 / 100149273 ZFINID:ZDB-GENE-091117-28 Length:421 Species:Danio rerio


Alignment Length:381 Identity:149/381 - (39%)
Similarity:229/381 - (60%) Gaps:37/381 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VVNGTG---STEVPQSNAEVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKIS- 70
            :..|.|   |.:|..|...|:|        ||.:|..||.||.|:|.||.||:....||:||:| 
Zfish     1 MTEGEGQFYSVQVGDSTFTVLR--------RYQQLRAIGSGAQGIVCSALDTVLGVPVAVKKLSR 57

  Fly    71 PFEHQTYCQRTLREITILTRFKHENIIDIRDILRVD-SIDQMRDVYIVQCLMETDLYKLLKTQRL 134
            ||::||:.:|..||:.:|....|:|||.:.::.... |:::.:|:|:|..||:..|.:::... |
Zfish    58 PFQNQTHAKRAYRELVLLKCVNHKNIIHLLNVFTPQKSLEEFQDLYLVMELMDASLCQVIHMD-L 121

  Fly   135 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGF-LT 198
            .::.:.|.|||||.|::::|||.::||||||||:::...|.|||.||||||.|     .|.| :|
Zfish   122 DHERMSYLLYQILCGIRHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----CTNFMMT 181

  Fly   199 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRD 263
            .||.||:|||||::|..| |.:::||||||||:.||:....||.|..::||.|.::.:||:||.:
Zfish   182 PYVVTRYYRAPEVILGMK-YKENVDIWSVGCIMGEMVKGSVIFQGTDHIDQWNKVIEILGTPSLE 245

  Fly   264 DLECIINEKARNYLESLPFKPNVPWAKLFPN------------ADALALDLLGKMLTFNPHKRIP 316
            .:..:: |..|||:.:.|..|.|.:.:|||:            ..:.|.|||.|||..:|..||.
Zfish   246 FMNRLM-ETVRNYVMNKPQFPGVSFNELFPDWAFPSETEHDKIKTSQARDLLSKMLVIDPECRIS 309

  Fly   317 VEEALAHPYLEQYYDP--GDEPVAEVPFRINMENDDISRDALKSLIFEETLKFKER 370
            |:|||.|||:..:|||  .|.|..::..: .:|..:.|.:..|.||::|.:.::||
Zfish   310 VQEALNHPYIHVWYDPAEADAPPPQISDK-QLEEREHSIEQWKELIYKEVMDWEER 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 140/350 (40%)
S_TKc 38..326 CDD:214567 127/302 (42%)
mapk9XP_001919688.1 STKc_JNK2 2..360 CDD:143381 147/374 (39%)
S_TKc 24..319 CDD:214567 127/302 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D741207at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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