DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT1G67480

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_001077785.1 Gene:AT1G67480 / 843069 AraportID:AT1G67480 Length:376 Species:Arabidopsis thaliana


Alignment Length:258 Identity:63/258 - (24%)
Similarity:101/258 - (39%) Gaps:65/258 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 GGYDGVEYFNTCRVFDAVKKKWNEIAPM-HCRRCYVSVTELNGMIYAIGG---YDGHNRLNT-VE 460
            ||.|     |...|.|.:.:|.:.:.|| ...:....|..::|.:..|.|   .:|....:. |.
plant   101 GGKD-----NRWEVMDCLGQKLSSLPPMPGPAKTGFKVVVVDGKLLVIAGCCMINGSLVASADVY 160

  Fly   461 RYNPRTNQWSVIPPMNMQRSDASACTLQERIYATGGFN-GQECLDSAEYYDPVTNVWTRIPNMNH 524
            :|:...|.||.:..:.:.|.|.:...:...:|..||.. ..|.|.|||.|||.|..||.|.::..
plant   161 QYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEVYDPETCTWTFIESLRR 225

  Fly   525 RRSGVSCVAFRNQLYVIGGFN----GTARLSTGERFDPDTQTWHFIREMNHSRSNFGLEIIDDMI 585
            .|.|....||..:|||:||.:    |.::|.  :.::....:||                     
plant   226 PRWGCFASAFNGKLYVMGGRSNFTIGNSKLL--DVYNTQCGSWH--------------------- 267

  Fly   586 FAIGGFNGVSTI-SHTE------C-----------YVAETDEWMEATDMNIVRSALSANNIAG 630
               |..||::.: :|.|      |           :.||.:.|      .:|...||.::.||
plant   268 ---GSKNGLTMVTAHVEVGKKLFCIDWKNHRKMSVFNAEDETW------EVVALPLSGSSRAG 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 57/236 (24%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874
KELCH repeat 385..428 CDD:276965 7/26 (27%)
Kelch 396..442 CDD:128874 10/41 (24%)
Kelch_1 431..476 CDD:279660 10/48 (21%)
KELCH repeat 432..475 CDD:276965 10/46 (22%)
KELCH repeat 479..523 CDD:276965 17/44 (39%)
Kelch 490..536 CDD:128874 19/46 (41%)
Kelch_1 525..570 CDD:279660 13/48 (27%)
KELCH repeat 526..571 CDD:276965 13/48 (27%)
Kelch_1 573..617 CDD:279660 9/61 (15%)
KELCH repeat 573..617 CDD:276965 9/61 (15%)
AT1G67480NP_001077785.1 F-box 38..79 CDD:279040
Kelch_1 129..175 CDD:279660 10/45 (22%)
KELCH repeat 130..175 CDD:276965 10/44 (23%)
Kelch_1 178..224 CDD:279660 17/45 (38%)
KELCH repeat 179..224 CDD:276965 17/44 (39%)
KELCH repeat 227..267 CDD:276965 11/41 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.860

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