DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klhl10 and AT1G27420

DIOPT Version :10

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_174062.1 Gene:AT1G27420 / 839632 AraportID:AT1G27420 Length:346 Species:Arabidopsis thaliana


Alignment Length:196 Identity:67/196 - (34%)
Similarity:91/196 - (46%) Gaps:27/196 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 GP--RAYHGTAVL-GFKIFSIGGYDGVE--YFNTCRV--------FDAVKKKWNEIAPMHCRRCY 434
            ||  |.: |.||| |.||...|||..||  ..|:..|        ||.....|.::|.|:..|..
plant    96 GPLKRGF-GVAVLDGGKIVFFGGYTEVEGSGINSTTVSASADVYEFDPANNSWRKLAGMNIPRYN 159

  Fly   435 VSVTELNGMIYAIGGY--DGHNRLNTVERYNPRTNQWSVIPPMNMQRSDASACTLQERIYATGGF 497
            .:..|:||::|.|.||  |.:: |:..|.|||:|||||::...|.......|.....::||.|  
plant   160 FAFAEVNGLLYVIRGYSTDTYS-LSNAEVYNPKTNQWSLMHCPNRPVWRGFAFAFSSKLYAVG-- 221

  Fly   498 NGQECLDSAEYYDPVTNVWTRIPNMNHRRSGVSCVAFRNQLYVIGGFNGTARLSTGERFDPDTQT 562
            ||...:|   .|||.|..|..: |.....|..|....||::|.:.. |...||..   |||:..:
plant   222 NGSRFID---IYDPKTQTWEEL-NSEQSVSVYSYTVVRNKVYFMDR-NMPGRLGV---FDPEENS 278

  Fly   563 W 563
            |
plant   279 W 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB_POZ 62..>108 CDD:453885
PHA03098 86..610 CDD:222983 67/196 (34%)
KELCH repeat 385..428 CDD:276965 19/53 (36%)
KELCH repeat 432..475 CDD:276965 19/44 (43%)
KELCH repeat 479..523 CDD:276965 13/43 (30%)
KELCH repeat 526..571 CDD:276965 12/38 (32%)
KELCH repeat 573..617 CDD:276965
AT1G27420NP_174062.1 F-box_AtAFR-like 10..54 CDD:438923
NanM 78..306 CDD:442289 67/196 (34%)
KELCH repeat 100..153 CDD:276965 19/53 (36%)
KELCH repeat 157..202 CDD:276965 19/45 (42%)
KELCH repeat 205..242 CDD:276965 12/42 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.