DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT1G27420

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_174062.1 Gene:AT1G27420 / 839632 AraportID:AT1G27420 Length:346 Species:Arabidopsis thaliana


Alignment Length:196 Identity:67/196 - (34%)
Similarity:91/196 - (46%) Gaps:27/196 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 GP--RAYHGTAVL-GFKIFSIGGYDGVE--YFNTCRV--------FDAVKKKWNEIAPMHCRRCY 434
            ||  |.: |.||| |.||...|||..||  ..|:..|        ||.....|.::|.|:..|..
plant    96 GPLKRGF-GVAVLDGGKIVFFGGYTEVEGSGINSTTVSASADVYEFDPANNSWRKLAGMNIPRYN 159

  Fly   435 VSVTELNGMIYAIGGY--DGHNRLNTVERYNPRTNQWSVIPPMNMQRSDASACTLQERIYATGGF 497
            .:..|:||::|.|.||  |.:: |:..|.|||:|||||::...|.......|.....::||.|  
plant   160 FAFAEVNGLLYVIRGYSTDTYS-LSNAEVYNPKTNQWSLMHCPNRPVWRGFAFAFSSKLYAVG-- 221

  Fly   498 NGQECLDSAEYYDPVTNVWTRIPNMNHRRSGVSCVAFRNQLYVIGGFNGTARLSTGERFDPDTQT 562
            ||...:|   .|||.|..|..: |.....|..|....||::|.:.. |...||..   |||:..:
plant   222 NGSRFID---IYDPKTQTWEEL-NSEQSVSVYSYTVVRNKVYFMDR-NMPGRLGV---FDPEENS 278

  Fly   563 W 563
            |
plant   279 W 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 67/196 (34%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874 7/13 (54%)
KELCH repeat 385..428 CDD:276965 19/53 (36%)
Kelch 396..442 CDD:128874 16/55 (29%)
Kelch_1 431..476 CDD:279660 19/46 (41%)
KELCH repeat 432..475 CDD:276965 19/44 (43%)
KELCH repeat 479..523 CDD:276965 13/43 (30%)
Kelch 490..536 CDD:128874 14/45 (31%)
Kelch_1 525..570 CDD:279660 12/39 (31%)
KELCH repeat 526..571 CDD:276965 12/38 (32%)
Kelch_1 573..617 CDD:279660
KELCH repeat 573..617 CDD:276965
AT1G27420NP_174062.1 F-box 9..50 CDD:395521
PHA03098 <81..286 CDD:222983 67/196 (34%)
KELCH repeat 100..153 CDD:276965 19/53 (36%)
KELCH repeat 157..202 CDD:276965 19/45 (42%)
KELCH repeat 205..242 CDD:276965 12/42 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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