DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT1G19460

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_173378.1 Gene:AT1G19460 / 838530 AraportID:AT1G19460 Length:416 Species:Arabidopsis thaliana


Alignment Length:309 Identity:61/309 - (19%)
Similarity:109/309 - (35%) Gaps:94/309 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 GCIETY--------DTRADRWVTINAEDPAG---------PRAYHGTAV--LGFKIFSIGGYDGV 406
            |..||:        ||....|..::....:.         |...:|.:|  :|.:::.|||...|
plant   102 GLSETFLYAAIRFPDTNPPNWYILHRNKVSSLRLSKLESLPPVPYGCSVVTIGQEMYVIGGLLDV 166

  Fly   407 EYFNTCRVFDAVKKKWNEIAPMHCRRCYVSVTELNGMIYAIGGYDGHNRLNT-----VERYNPRT 466
            .......:.|....|...:..|...|.:.:....:|.||.|||:    |:..     :|.::.:.
plant   167 RRLQLMTLIDCRTHKCRSLPKMKRGRYHAAAGVFDGKIYVIGGF----RMRKPDAEWIEVFDLKK 227

  Fly   467 NQWSVIP---PMNMQRSDASA-CTLQERIYATGGFNGQECL----------DSAEYYDPVTNVWT 517
            ..|..:|   |.....|...| ..:::::|..    |..||          |:....:|:.|:| 
plant   228 QIWESLPGPYPKTSMDSQFFAHAVMEDKLYIL----GSRCLIYEPKRNGEWDATVNANPIWNLW- 287

  Fly   518 RIPNMNHRRSGVSCVAFRNQLYVIGGFNGTARLSTGER---FDPDTQTW-------------HFI 566
            ::|      ..:.|| ..:.||.|     ..:.:.|..   ::|..:||             :|:
plant   288 KVP------CTMQCV-IDDMLYTI-----DPQCTLGHPIVVYNPKDKTWRPVKGESLRTLPSYFV 340

  Fly   567 REMNHSRSNFGLEIIDDMIFAIGGFNGVSTISHTECY-----VAETDEW 610
            .: ....:|||.:::      |.|.||       .||     :.|...|
plant   341 SD-GSEMANFGGKLV------ILGSNG-------SCYDTGDCIGEKGIW 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 60/307 (20%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874 9/51 (18%)
KELCH repeat 385..428 CDD:276965 9/44 (20%)
Kelch 396..442 CDD:128874 8/45 (18%)
Kelch_1 431..476 CDD:279660 12/52 (23%)
KELCH repeat 432..475 CDD:276965 11/50 (22%)
KELCH repeat 479..523 CDD:276965 11/54 (20%)
Kelch 490..536 CDD:128874 11/55 (20%)
Kelch_1 525..570 CDD:279660 10/60 (17%)
KELCH repeat 526..571 CDD:276965 10/60 (17%)
Kelch_1 573..617 CDD:279660 11/43 (26%)
KELCH repeat 573..617 CDD:276965 11/43 (26%)
AT1G19460NP_173378.1 PHA03098 <128..329 CDD:222983 43/221 (19%)
KELCH repeat 146..188 CDD:276965 9/41 (22%)
KELCH repeat 192..243 CDD:276965 12/54 (22%)
Kelch_1 192..234 CDD:366584 10/45 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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