DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT5G51250

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_199938.1 Gene:AT5G51250 / 835199 AraportID:AT5G51250 Length:368 Species:Arabidopsis thaliana


Alignment Length:304 Identity:61/304 - (20%)
Similarity:95/304 - (31%) Gaps:88/304 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 AGPRAYHGTAVLG------FKIFSIGGYDGVEYFNTCRVFDAV-------KKKWNEIA------P 427
            |.|..|...::||      :..|.........:|..||..|..       |||.|...      |
plant    36 ASPDLYKARSLLGHTESCLYVCFHFDSGPNTHWFTLCRKPDGTLTNDTSKKKKSNGYVLATVPIP 100

  Fly   428 MHCRRCYVSVTELNGMIYAIGG--YDGHNRLNTVERYNPRTNQWSVIPPMNMQRSDASACTLQER 490
            ......:.|:..:...||.|||  |.|.:. ::|...:.:::.|...|.:.::....||..|..:
plant   101 HSPPANFSSLVAVGSDIYNIGGSIYLGPSS-SSVSILDSQSHMWREAPSLRVELMSHSASVLDRK 164

  Fly   491 IYATGGF---NG--QECLDSAEYYDPVTNVW---------------------------------- 516
            ||..|.:   ||  ..|.:..|.:|..|.||                                  
plant   165 IYVAGSYKDGNGDSNSCKNLFEVFDTKTQVWHPEPIPCSKTKGIFYSKSACIDGKFHVETTHGVV 229

  Fly   517 ---------TRIPNMNHRRSGVSCVAFRNQLYVIGGFNGTARLSTGERFDPDTQTWHFIREMNHS 572
                     ..||.|...|:..|.....|.|:.|  ..|..|.     :|...:.|..::.:   
plant   230 YAYKEGRWDKAIPTMFGMRASYSFCEINNVLFYI--HRGVFRW-----YDTKLRMWRILKGL--- 284

  Fly   573 RSNFGL-EIIDDMIFAIGGFNGVSTISHTE----CYVAETDEWM 611
               .|| .:.::|...:..:.|...:...|    |.....||.|
plant   285 ---LGLPSLPENMFVRLADYGGKMAVLWEEDRPSCGAGGRDEMM 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 59/301 (20%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874 3/11 (27%)
KELCH repeat 385..428 CDD:276965 12/61 (20%)
Kelch 396..442 CDD:128874 11/58 (19%)
Kelch_1 431..476 CDD:279660 11/46 (24%)
KELCH repeat 432..475 CDD:276965 11/44 (25%)
KELCH repeat 479..523 CDD:276965 16/91 (18%)
Kelch 490..536 CDD:128874 16/93 (17%)
Kelch_1 525..570 CDD:279660 9/44 (20%)
KELCH repeat 526..571 CDD:276965 9/44 (20%)
Kelch_1 573..617 CDD:279660 9/44 (20%)
KELCH repeat 573..617 CDD:276965 9/44 (20%)
AT5G51250NP_199938.1 F-box 1..46 CDD:279040 3/9 (33%)
KELCH repeat 109..149 CDD:276965 11/40 (28%)
Kelch_2 153..201 CDD:284956 14/47 (30%)
KELCH repeat 153..199 CDD:276965 14/45 (31%)
KELCH repeat 202..244 CDD:276965 2/41 (5%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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