DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT5G03000

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_195920.1 Gene:AT5G03000 / 831712 AraportID:AT5G03000 Length:354 Species:Arabidopsis thaliana


Alignment Length:219 Identity:49/219 - (22%)
Similarity:88/219 - (40%) Gaps:43/219 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   418 VKKKWNEI--AP-MHCRRCYVSVTELNGMIYAIGGYDGHNRLNTVERYNPRTNQWSVIPPMNMQR 479
            |.|::..:  :| :...|..:.||| |.:...:..    |:.|.    |||   |..:.|:..::
plant    66 VNKEFQSLIASPDLEATRSRIGVTE-NHLYVCLES----NKNNP----NPR---WFTLAPIPKEQ 118

  Fly   480 --------------SDASACTLQERIYATGGFNGQECLDSAEYYDPVTNVWTRIPNMNHRRSGVS 530
                          :.::..::...||..|||..::........|..::...|:|||...|...:
plant   119 KVKPIIPSFPYQHPTSSTFVSIGSEIYIIGGFVKRKRSRRVLVLDCRSHQCRRLPNMALPRVSAA 183

  Fly   531 CVAFRNQLYVIGGFNGTARLSTGERFDPDTQTWHFI----REMNHSRSNFGLEIIDDMIFAIGG- 590
            ......::||:||.......:.||.|||:||||..|    .::...:|.|..:::      :|| 
plant   184 ADVIDGKIYVVGGSKSKNIDNWGEVFDPETQTWEPIFPTTVDLTTQKSVFPGKLV------MGGK 242

  Fly   591 ---FNGVSTISHTECYVAETDEWM 611
               .:|:....:....|.|.|..|
plant   243 VYDMDGLKVNLNLNSCVVEIDNMM 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 48/216 (22%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874
KELCH repeat 385..428 CDD:276965 3/12 (25%)
Kelch 396..442 CDD:128874 7/26 (27%)
Kelch_1 431..476 CDD:279660 12/44 (27%)
KELCH repeat 432..475 CDD:276965 11/42 (26%)
KELCH repeat 479..523 CDD:276965 9/57 (16%)
Kelch 490..536 CDD:128874 11/45 (24%)
Kelch_1 525..570 CDD:279660 15/48 (31%)
KELCH repeat 526..571 CDD:276965 15/48 (31%)
Kelch_1 573..617 CDD:279660 9/43 (21%)
KELCH repeat 573..617 CDD:276965 9/43 (21%)
AT5G03000NP_195920.1 F-box 40..85 CDD:279040 4/18 (22%)
KELCH repeat 138..175 CDD:276965 8/36 (22%)
Kelch 144..189 CDD:128874 11/44 (25%)
Kelch_1 178..219 CDD:279660 14/40 (35%)
KELCH repeat 179..227 CDD:276965 15/47 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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