DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT5G03020

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_195922.1 Gene:AT5G03020 / 831706 AraportID:AT5G03020 Length:347 Species:Arabidopsis thaliana


Alignment Length:272 Identity:67/272 - (24%)
Similarity:102/272 - (37%) Gaps:67/272 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 VFDAV-KKKWNEIAPMHCRR---CYVSVTELNGMIYAIGGYDGHNRLNTVERYNPRTNQWSVIPP 474
            :|..: |:|...|.|....:   .|.:|......||.|||:....|.|.|..::.||.||..:|.
plant    86 IFSPIPKQKLKPIVPWFPNQQYPQYPTVVSNGSQIYIIGGFVRRRRSNRVSIFDYRTYQWRRLPK 150

  Fly   475 MNMQRSDASACTLQERIYATGGFNGQECLD---SAEYYDPVTNVW---------TRIPNMNHRR- 526
            |...|...:|..:..:||..|||.|....|   |.|.|||.||.|         ..:.|:..:: 
plant   151 MRQPRVYPAASVIDGKIYVIGGFRGSMPTDIENSGEVYDPKTNTWEPILLTSLDLTVQNVFKKKH 215

  Fly   527 ----------SGVSCVAFRNQLYVIGGFNGTARLSTGERFDPDTQTWHFIREMNHSRSNFGLEII 581
                      :.|||:     |||          |.|:.:      |...:|....|..:||...
plant   216 YFTTKACLVINKVSCL-----LYV----------SDGKLY------WREDKEGFECRKVYGLAEQ 259

  Fly   582 DDMIFAI---GGFNGVSTI---SHT-----ECYV---AETDEW-----MEATDMNIVRSALSANN 627
            ...:|.:   .|..|..|:   |.|     :|.:   .||..|     :|...:..:|..:..:.
plant   260 SSNLFRVVANSGGGGRVTVWWKSMTKGCEFDCLLTEECETKIWCAEISLERRGLRELRGFVEWSK 324

  Fly   628 IAGLPNKRDYIH 639
            .....::.|||:
plant   325 EVFTIDRCDYIY 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 61/236 (26%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874
KELCH repeat 385..428 CDD:276965 4/14 (29%)
Kelch 396..442 CDD:128874 7/31 (23%)
Kelch_1 431..476 CDD:279660 15/47 (32%)
KELCH repeat 432..475 CDD:276965 15/45 (33%)
KELCH repeat 479..523 CDD:276965 18/55 (33%)
Kelch 490..536 CDD:128874 19/68 (28%)
Kelch_1 525..570 CDD:279660 10/55 (18%)
KELCH repeat 526..571 CDD:276965 10/55 (18%)
Kelch_1 573..617 CDD:279660 14/62 (23%)
KELCH repeat 573..617 CDD:276965 14/62 (23%)
AT5G03020NP_195922.1 KELCH repeat 110..151 CDD:276965 15/40 (38%)
Kelch 119..165 CDD:128874 16/45 (36%)
Kelch_1 154..198 CDD:279660 17/43 (40%)
KELCH repeat 155..198 CDD:276965 17/42 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D277265at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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