DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT4G39760

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_195686.1 Gene:AT4G39760 / 830134 AraportID:AT4G39760 Length:369 Species:Arabidopsis thaliana


Alignment Length:390 Identity:75/390 - (19%)
Similarity:131/390 - (33%) Gaps:119/390 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 PQADELTTPPLAMPRLPHEVIFAIGGWSGGT--SKGCI------------ETYDTRADR------ 372
            ||:   |...|:...||||::.:......|:  .|.|:            |.|..|:..      
plant     8 PQS---TNHSLSFSSLPHEIVVSCLARVSGSYYPKLCLVSKQFRSIILSNEIYKARSHLGTKENR 69

  Fly   373 ---WVTINAEDPAGPRAYHGTAVLGFKIFSIGGYDGVEYFNTCRVFDAVKKK--WNEIAPMHCRR 432
               |:.:..      |:|.....|..|.......||           .:||:  .|.:.|:.|..
plant    70 LFVWLKLPT------RSYPSWFALWIKPNETLTNDG-----------PIKKQSTGNLLVPLPCSY 117

  Fly   433 CY---VSVTELNGMIYAIGGYDGHNRLNTVERYNPRTNQWSVIPPMNMQRSDASACTLQERIYAT 494
            .|   |....:....|.:||||.....:.....|.:.:..|..|.|::.|.||........||..
plant   118 NYQVLVPSVIVGSETYIVGGYDDALSSSVWFYKNGKIHTLSKSPSMSVARIDAVVVGQYPNIYVM 182

  Fly   495 GGFNGQECLDSAEYYDPVTNVWTRIPNMNHRRSGVSCVAFRNQ---LYVIGGFNGTARLSTGER- 555
            ||.:..|.::..|.::..|..|..:|:......|......:.|   :||           :.|: 
plant   183 GGCDSDESMNWGEVFNIKTQTWEPLPDPGPEVRGQLVRKMKMQKKNVYV-----------SSEKK 236

  Fly   556 ---FDPDTQTWHFIREMNHSRSNFGLEIIDDMIFAIGGFNGVSTISHTECYVAET--DEWMEATD 615
               :|.:.:||    ::..:..||...:|:.:.:.....|         |:..:|  .:|     
plant   237 DYIYDTEERTW----KVTEAVFNFSWCVIEKVRYIYYNKN---------CWWLDTKSKDW----- 283

  Fly   616 MNIVRSALSANNIAGLPNKRDYIHK--ERDRL-----------------MEERRQRLMATAMARE 661
                      ..|.||    |:::|  |.||:                 :.:|.:::....:|.|
plant   284 ----------RKIKGL----DFLNKFRETDRIEIVNLDGKLVMIWDRFTLSKRNKKIWCAMIALE 334

  Fly   662  661
            plant   335  334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 63/318 (20%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874 9/69 (13%)
KELCH repeat 385..428 CDD:276965 9/44 (20%)
Kelch 396..442 CDD:128874 10/50 (20%)
Kelch_1 431..476 CDD:279660 10/47 (21%)
KELCH repeat 432..475 CDD:276965 10/45 (22%)
KELCH repeat 479..523 CDD:276965 12/43 (28%)
Kelch 490..536 CDD:128874 10/45 (22%)
Kelch_1 525..570 CDD:279660 8/51 (16%)
KELCH repeat 526..571 CDD:276965 8/51 (16%)
Kelch_1 573..617 CDD:279660 7/45 (16%)
KELCH repeat 573..617 CDD:276965 7/45 (16%)
AT4G39760NP_195686.1 F-box 16..62 CDD:279040 10/45 (22%)
KELCH repeat 167..212 CDD:276965 12/44 (27%)
Kelch_1 170..211 CDD:279660 10/40 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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