DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT4G39580

DIOPT Version :10

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_195668.1 Gene:AT4G39580 / 830112 AraportID:AT4G39580 Length:375 Species:Arabidopsis thaliana


Alignment Length:162 Identity:42/162 - (25%)
Similarity:68/162 - (41%) Gaps:11/162 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 AGPRAYHGTAVLGFKIFSIGGYDGVEYFNTCRVFDAVKKKWNEIAPMHCRRCYVSVTELNGMIYA 446
            |.|..:.....:.:.|::|||.......::..|.|...:||.|...|...|.|.:.|.|:|.||.
plant   118 APPAHWSSVVAVDYNIYAIGGPINDAPSSSVSVLDCQCEKWREAPSMRVARNYPTATVLDGKIYV 182

  Fly   447 IGGYDGHNRLNTVERYNPRTNQWSVIPPMNMQRSDASACTLQERIYATGGFNGQECLDSAE---Y 508
            .||.:....|:.:|.::|:|..|..:.....:|     |  :..:|.:.|..|:..|....   .
plant   183 AGGCEDCTSLDCIEVFDPKTQTWDSVASPGTER-----C--ERLVYKSVGIEGKYHLFGGAGHVA 240

  Fly   509 YDPVTNVWTRI-PNMNHRRSGVSCVAFRNQLY 539
            |||....|..: .:|...|:.||.....|.|:
plant   241 YDPKEGRWDSVGMDMEMGRTWVSYCVINNILF 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB_POZ 62..>108 CDD:453885
PHA03098 86..610 CDD:222983 42/162 (26%)
KELCH repeat 385..428 CDD:276965 9/42 (21%)
KELCH repeat 432..475 CDD:276965 14/42 (33%)
KELCH repeat 479..523 CDD:276965 10/47 (21%)
KELCH repeat 526..571 CDD:276965 5/14 (36%)
KELCH repeat 573..617 CDD:276965
AT4G39580NP_195668.1 F-box_AtAFR-like 26..66 CDD:438923
NanM 124..>269 CDD:442289 38/151 (25%)
KELCH repeat 125..164 CDD:276965 9/38 (24%)
KELCH repeat 168..212 CDD:276965 14/43 (33%)
Blue background indicates that the domain is not in the aligned region.

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