DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT4G39240

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_195635.1 Gene:AT4G39240 / 830080 AraportID:AT4G39240 Length:375 Species:Arabidopsis thaliana


Alignment Length:400 Identity:78/400 - (19%)
Similarity:142/400 - (35%) Gaps:133/400 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 VKWIDRNPESRKRHVAHLMTGVRLGLMTPKC------FMEEVKEHPYVLECEAAKP--------L 312
            |..|...|..:|:|..           :|.|      ..:|:     :|.|.|..|        |
plant    11 VSSIAEEPPPKKQHDP-----------SPSCSSYLLLLPDEI-----ILNCLARLPKCYYPVISL 59

  Fly   313 IVDTFKFMYDLDFLNPQADELTTPPL----AMPRLPHEVIFAIGGWSGGTSKGCIETYDTRADRW 373
            :..||:.:            :.:|.:    ::.|....|::.:           :.::.|...||
plant    60 VSKTFRRL------------IASPEIYVERSLLRRTERVLYVV-----------LRSHATETPRW 101

  Fly   374 VTINAEDPAGPRAYH--------------GTAVLGF--KIFSIGGYDGVEYF----------NTC 412
            .|:|.:........|              |.:::..  :|:.:||....|..          :||
plant   102 YTLNFKPFGNDSNNHRLVPIPSFPSIPCWGMSIVAIDSEIYVLGGCIDNELVSTGFVVECPSHTC 166

  Fly   413 RVFDAVKKKWNEIAPMHCRRCYVSVTELNGMIYAIGGYDGHNRLNTVERYNPRTNQW-SVIPPMN 476
            |:..::|:         .|.| .:|...:|.:|.|||.:..: :|.||.::.:|..| |.:...|
plant   167 RLLPSMKQ---------ARGC-AAVGFFDGKLYVIGGCNPLS-VNWVEAFDLKTQTWESGLGVNN 220

  Fly   477 MQRSDAS--ACTLQERIYATGGFNGQECLDSAEYYDPVTNVWTRIPNMNHRRSGVSCVAFRNQLY 539
            ::..|.:  :..:.::||.....|       :..|||..........::.:.|..||| ...::|
plant   221 VEMHDLTIRSFAIDDKIYIMDRKN-------SFVYDPKEGTLETDELLDTQWSVGSCV-IDGKIY 277

  Fly   540 VIGGFNGTARLSTGERFDPDTQTWHFIREMNHSRSNFGLEIIDD-----MIFAIGG-----FN-- 592
            ..|..|   |:..   |||....|..::         ||:.:.|     .:..:||     ||  
plant   278 TFGSKN---RIWV---FDPIAMVWDRLK---------GLDDLPDKRDGSRMSNLGGNLAIMFNLE 327

  Fly   593 -GVSTISHTE 601
             |.:.|..||
plant   328 KGSTKICCTE 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 77/399 (19%)
BACK 195..298 CDD:285009 8/41 (20%)
Kelch 347..394 CDD:128874 8/60 (13%)
KELCH repeat 385..428 CDD:276965 10/68 (15%)
Kelch 396..442 CDD:128874 11/55 (20%)
Kelch_1 431..476 CDD:279660 14/45 (31%)
KELCH repeat 432..475 CDD:276965 13/43 (30%)
KELCH repeat 479..523 CDD:276965 7/45 (16%)
Kelch 490..536 CDD:128874 10/45 (22%)
Kelch_1 525..570 CDD:279660 12/44 (27%)
KELCH repeat 526..571 CDD:276965 12/44 (27%)
Kelch_1 573..617 CDD:279660 10/41 (24%)
KELCH repeat 573..617 CDD:276965 10/41 (24%)
AT4G39240NP_195635.1 F-box 34..79 CDD:279040 9/61 (15%)
Kelch_1 131..173 CDD:279660 8/41 (20%)
KELCH repeat 131..172 CDD:276965 8/40 (20%)
Kelch_1 175..215 CDD:279660 13/41 (32%)
KELCH repeat 176..224 CDD:276965 15/49 (31%)
KELCH repeat 264..298 CDD:276965 12/40 (30%)
Kelch_2 269..301 CDD:284956 11/47 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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