DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT4G29370

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_194666.1 Gene:AT4G29370 / 829058 AraportID:AT4G29370 Length:378 Species:Arabidopsis thaliana


Alignment Length:225 Identity:54/225 - (24%)
Similarity:85/225 - (37%) Gaps:46/225 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 SVTELNGMIYAIGGYDGHNRLNTVERYNPRTNQWSVIPPMNMQRSDASACTLQERIYATGGFNGQ 500
            |...:...||.....|.....:.:..|:..|..|..:|.|.|:|.:||||.|.::||..||    
plant   119 STVTMGSKIYGEHMGDAFGPSSAIWIYDCFTRSWGDVPNMKMKRENASACVLDDKIYVMGG---- 179

  Fly   501 ECLDSA-----EYYDPVTNVWTRIPNMNHRRSGVSCVAFRN--QLYVIGGFNGTARLSTGERF-- 556
             | ||.     |.:|..|..|..:|    ....|..:...|  ::.|:|   |...:.||..|  
plant   180 -C-DSGGINWFEMFDVKTQCWRPLP----ANPDVKVMTEDNVRKIDVVG---GKIYVKTGAEFMD 235

  Fly   557 ---DPDTQTWHFIRE-MNHSRSNFGLEIIDDMIFAIGGFNGVSTISHTECYVAETDEWMEATDMN 617
               |.....|....| |:...||... :|:::::..       :.|....|..|...|.|...:.
plant   236 WIYDVKRGKWSAADEYMSLLWSNSWC-VIENVMYCY-------SCSRYRWYDLEARMWREVKGLK 292

  Fly   618 IVRSALSANNIAGLPNKRDYIHKERDRLME 647
            .::...||:|            ..|:|::|
plant   293 YLKRYSSASN------------DNRNRMVE 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 46/186 (25%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874
KELCH repeat 385..428 CDD:276965
Kelch 396..442 CDD:128874 1/5 (20%)
Kelch_1 431..476 CDD:279660 8/39 (21%)
KELCH repeat 432..475 CDD:276965 8/38 (21%)
KELCH repeat 479..523 CDD:276965 18/48 (38%)
Kelch 490..536 CDD:128874 13/50 (26%)
Kelch_1 525..570 CDD:279660 11/52 (21%)
KELCH repeat 526..571 CDD:276965 12/52 (23%)
Kelch_1 573..617 CDD:279660 8/43 (19%)
KELCH repeat 573..617 CDD:276965 8/43 (19%)
AT4G29370NP_194666.1 F-box 24..66 CDD:395521
PHA03098 <115..>202 CDD:222983 27/88 (31%)
KELCH repeat 116..158 CDD:276965 8/38 (21%)
KELCH repeat 162..205 CDD:276965 18/52 (35%)
Kelch_1 162..202 CDD:396078 17/45 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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