DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT4G19865

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_849411.1 Gene:AT4G19865 / 827732 AraportID:AT4G19865 Length:393 Species:Arabidopsis thaliana


Alignment Length:217 Identity:51/217 - (23%)
Similarity:77/217 - (35%) Gaps:44/217 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 TAVLGFKIFSIGGYDGVEYFNTCRVFDAVKKKWNEIAPMHCRRCYVSVTELNGMIYAIGGYDGHN 454
            |.|:|.:|:.:||    ...:..||.|.....|.:...|:..|........:|.||.:||..|..
plant   142 TVVVGSEIYVLGG----PVDSAVRVLDCCSHTWRDAPSMNVSRMNAWACFHDGKIYVMGGCQGLK 202

  Fly   455 RLNTVERYNPRTNQWSVIPPMNMQRSDASACTLQERIYATG----GFNGQECLDSAEYYDPVTNV 515
            .....|.:|.:|..|..:|...   |:...|::.......|    |...:.|.     ||.....
plant   203 DEPWAEVFNTKTQTWEGLPEPG---SEVRKCSIDRSGVIEGKIEFGNVNEMCA-----YDTKLCK 259

  Fly   516 WTRIPNMNHRRSGVSCVAFRNQLYV----IGGFNGTARLSTGERFDPDTQT--WHFIREMNHSRS 574
            |....|.:        .|.|::..:    .|.:|  .||..   :|.|.|.  |..:.       
plant   260 WEYCVNKS--------AALRSECMIENVSYGFWN--MRLLW---YDNDIQKDYWKRLE------- 304

  Fly   575 NFGLEIIDDMIFAIGGFNGVST 596
              |||.:||.....||.:|.:|
plant   305 --GLESLDDKYMRNGGSSGNTT 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 51/217 (24%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874 2/3 (67%)
KELCH repeat 385..428 CDD:276965 10/37 (27%)
Kelch 396..442 CDD:128874 9/45 (20%)
Kelch_1 431..476 CDD:279660 12/44 (27%)
KELCH repeat 432..475 CDD:276965 12/42 (29%)
KELCH repeat 479..523 CDD:276965 9/47 (19%)
Kelch 490..536 CDD:128874 8/49 (16%)
Kelch_1 525..570 CDD:279660 10/50 (20%)
KELCH repeat 526..571 CDD:276965 10/50 (20%)
Kelch_1 573..617 CDD:279660 9/24 (38%)
KELCH repeat 573..617 CDD:276965 9/24 (38%)
AT4G19865NP_849411.1 F-box 35..75 CDD:279040
KELCH repeat 141..176 CDD:276965 10/37 (27%)
Kelch 149..190 CDD:128874 9/44 (20%)
KELCH repeat 180..231 CDD:276965 13/53 (25%)
Kelch_1 185..224 CDD:279660 11/38 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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