DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and SKIP4

DIOPT Version :10

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_567112.1 Gene:SKIP4 / 825307 AraportID:AT3G61350 Length:358 Species:Arabidopsis thaliana


Alignment Length:242 Identity:66/242 - (27%)
Similarity:101/242 - (41%) Gaps:18/242 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 SGGTSKGCIETYDTRADRWVTINAEDPAGPRAYHGTAVLGFKIFSIGGYDGVE-YFNTCRVFDAV 418
            |||.....:..:.:|.. |..||.......|...|.||||.::|.:||...:| ..:....:||.
plant    83 SGGVFLHMLNPFSSRRS-WKRINDYPYIPMREGMGFAVLGKRLFVLGGCGWLEDATDEIYCYDAA 146

  Fly   419 KKKWNEIA-PMHCRRCYVSVTELNGMIYAIGGYD-GHNRLNTVERYNPRTNQWSVIPPMNMQRSD 481
            ...|.::. |:..:|||.:...|:|.|.||||.. ..|...|.:.|:|.|........:|:....
plant   147 MNTWFDVVPPLSTKRCYFACETLDGKIIAIGGLGLNPNAKRTWDIYDPLTRTCKSCSDVNIVPEM 211

  Fly   482 ASACTLQERIYATGGFNGQECLDSAEYYDPVTNVWTRIPNMNHRRSG--VSCVAFRNQLYVIGGF 544
            ..:..:..|||..||..|    .|...|...:.:|.|:.  :...||  ...|.....|||:...
plant   212 EDSFVMDGRIYIRGGVGG----SSTAVYSASSGIWERMD--DDMASGWRGPAVVVAGDLYVLDQT 270

  Fly   545 NGTARLSTGERFDPDTQTWHFIREMNH--SRSNFGLEIIDDMIFAIG 589
            .| |:|:   .:..||:.|..|.:::.  .:....|..|.:.||.||
plant   271 FG-AKLT---MWCKDTRMWIHIGKLSQLVMKQPCRLVSIGNSIFVIG 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB_POZ 62..>108 CDD:453885
PHA03098 86..610 CDD:222983 66/242 (27%)
KELCH repeat 385..428 CDD:276965 13/44 (30%)
KELCH repeat 432..475 CDD:276965 15/43 (35%)
KELCH repeat 479..523 CDD:276965 10/43 (23%)
KELCH repeat 526..571 CDD:276965 13/46 (28%)
KELCH repeat 573..617 CDD:276965 6/17 (35%)
SKIP4NP_567112.1 F-box_AtAFR-like 21..65 CDD:438923
NanM 88..313 CDD:442289 61/235 (26%)
KELCH repeat 112..157 CDD:276965 13/44 (30%)
KELCH repeat 161..212 CDD:276965 16/50 (32%)
Blue background indicates that the domain is not in the aligned region.

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