DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klhl10 and AT3G27220

DIOPT Version :10

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_566812.1 Gene:AT3G27220 / 822341 AraportID:AT3G27220 Length:426 Species:Arabidopsis thaliana


Alignment Length:328 Identity:65/328 - (19%)
Similarity:103/328 - (31%) Gaps:111/328 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 WVTINAEDPAGPRAYHGTAVLGFKIF------SIGGYDGVEYFNTCRVF---DAVKKKWNEIAPM 428
            ||.:|..:...|       ::..||.      |....|.|.:.:.  :|   .|.:.||.|:...
plant    53 WVPVNRPEIQIP-------IIDSKIVQKRSKQSNDTKDHVRFLSA--IFADIPAPELKWEEMESA 108

  Fly   429 HCRRCYVSVTELNGMIYAIGGYDGHNRLNT-VERYNPRTNQW--SVIPPMNMQRSDASACTLQER 490
            ...|......::|.::|...||...:.::: |:.:|...|:|  ....|..|..|.....|....
plant   109 PVPRLDGYSVQINNLLYVFSGYGSLDYVHSHVDVFNFTDNKWCDRFHTPKEMANSHLGIVTDGRY 173

  Fly   491 IYATGGFNGQEC---------LDS------------AEYYDPVTNVWT-RIPNM---NHRRSGV- 529
            :|...|..|.:|         |||            |..|.|.|.:|. |:..|   ...|:.| 
plant   174 VYVVSGQLGPQCRGPTSRSFVLDSFTKTWLEFPSLPAPRYAPATQIWRGRLHVMGGSKENRNAVA 238

  Fly   530 ------------------------------SCVAFRNQLYVIGGFNG---------------TAR 549
                                          :||...::|.||||..|               ...
plant   239 FDHWSIAVKDGKALDEWREEVPIPRGGPHRACVVANDKLLVIGGQEGDFMAKPNSPIFKCSRRRE 303

  Fly   550 LSTGERFDPDTQ-TWHFIREM--NHSRSNFGLEIIDDMIFAIGGFNGVSTISHTECYVAETDEWM 611
            :..||.:..|.: .|..:..|  |:|.......|:::.|..:||                |.:|.
plant   304 IFNGEVYMMDEEMKWKMLPPMPKNNSHIESAWIIVNNSIVIVGG----------------TTDWH 352

  Fly   612 EAT 614
            ..|
plant   353 PVT 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB_POZ 62..>108 CDD:453885
PHA03098 86..610 CDD:222983 63/322 (20%)
KELCH repeat 385..428 CDD:276965 10/51 (20%)
KELCH repeat 432..475 CDD:276965 9/45 (20%)
KELCH repeat 479..523 CDD:276965 16/68 (24%)
KELCH repeat 526..571 CDD:276965 15/93 (16%)
KELCH repeat 573..617 CDD:276965 7/42 (17%)
AT3G27220NP_566812.1 NanM 102..406 CDD:442289 53/270 (20%)
KELCH repeat 117..158 CDD:276965 8/40 (20%)
KELCH repeat 163..208 CDD:276965 9/44 (20%)
KELCH repeat 212..260 CDD:276965 8/47 (17%)
KELCH repeat 263..325 CDD:276965 12/61 (20%)
KELCH repeat 328..381 CDD:276965 8/44 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.