DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klhl10 and AT3G08810

DIOPT Version :10

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_187493.1 Gene:AT3G08810 / 820028 AraportID:AT3G08810 Length:343 Species:Arabidopsis thaliana


Alignment Length:149 Identity:29/149 - (19%)
Similarity:56/149 - (37%) Gaps:32/149 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   510 DPVTNVWTRI-----PNMNHRRSGVSCVAFRNQLYVIGGFNGTA--------RLSTGERF----- 556
            |.:.:::.|:     |.::|.......:....:||.....:|..        |.|||.|:     
plant    29 DVLLSIFARVSRLYYPTLSHVSESFRSLLASPELYKARSLSGNTEICLYVCLRCSTGYRWFSLSR 93

  Fly   557 DPD-TQTWHFIREMNHS-------------RSNFGLEIIDDMIFAIGGFNGVSTISHTECYVAET 607
            .|| |.|:...:...::             ||:..:.:..|:....|..|..|:.|.......::
plant    94 KPDQTLTYEERKSSGYALARVPIPGGSPNVRSSSLVAVGSDIYNICGSINKASSSSSVSILDCQS 158

  Fly   608 DEWMEATDMNIVRSALSAN 626
            ..|.||..:.:..|::||:
plant   159 HTWREAPSLPVELSSISAS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB_POZ 62..>108 CDD:453885
PHA03098 86..610 CDD:222983 23/131 (18%)
KELCH repeat 385..428 CDD:276965
KELCH repeat 432..475 CDD:276965
KELCH repeat 479..523 CDD:276965 3/17 (18%)
KELCH repeat 526..571 CDD:276965 12/58 (21%)
KELCH repeat 573..617 CDD:276965 10/43 (23%)
AT3G08810NP_187493.1 F-box_AtAFR-like 24..66 CDD:438923 6/36 (17%)
Kelch_6 126..169 CDD:404790 8/42 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.