DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT3G06570

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_566286.1 Gene:AT3G06570 / 819836 AraportID:AT3G06570 Length:390 Species:Arabidopsis thaliana


Alignment Length:322 Identity:72/322 - (22%)
Similarity:115/322 - (35%) Gaps:88/322 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 PRAYHGTAVLGFKIF-------------------------SIGGYDGVEYFNTCRVFDAV----- 418
            ||.||.|..|..|.|                         ||..|.....|..||..|..     
plant    42 PRLYHRTVSLVCKSFRSLLVSPELYKARSVSGHTESCLYLSIACYPDYRMFTLCRKPDQTLTTSE 106

  Fly   419 ---KKKWN----------EIAPMHCRRCYVSVTELNGMIYAIGGYDGHNRLNTVERYNPRTNQWS 470
               |||.|          :..|::    :.|:..:...||.|.|....:.::.::   .|:|.|.
plant   107 EEEKKKSNGYYLAPVPDPDSHPVY----FSSLVTVGSDIYNIAGSHASSNVSILD---CRSNTWR 164

  Fly   471 VIPPMNMQRSDASACTLQERIYATGGFNGQECLDSA----EYYDPVTNVWTRIP-NMNHRRSG-V 529
            ..|.:.::.:..||..|..:|:..|.:...|..:|.    |..|..|:.|...| |.:..:.. :
plant   165 EAPRLGVELTSVSASVLDRKIFVVGMYADDEESESKNDFFEVLDTETHTWDPQPFNCSETKDKFL 229

  Fly   530 SC-VAFRNQLYVIGGF--NGTARLSTGE-RFDPDTQTWHFIREMNHSRSNFGLEIIDDMIFAIGG 590
            :| .||.:..:::..:  .|....::.| |::| .||     :|..|..|.....|.::|:.  .
plant   230 NCRTAFIDGKFLVKPWIHRGVVAYNSKESRWEP-VQT-----KMAMSMFNDSYCQIHNVIYL--A 286

  Fly   591 FNGVSTISHTECYVAETDEWMEATDM----NI------VRSALSANNIA-----GLPNKRDY 637
            |:|     ....|....:.|.:...:    ||      ||.|....|||     .||:..||
plant   287 FDG-----RIRWYDDALNCWGDVQGLLELGNIPHGPSCVRLADYRGNIAVFWFRYLPDNDDY 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 59/278 (21%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874 5/9 (56%)
KELCH repeat 385..428 CDD:276965 18/85 (21%)
Kelch 396..442 CDD:128874 15/88 (17%)
Kelch_1 431..476 CDD:279660 9/44 (20%)
KELCH repeat 432..475 CDD:276965 9/42 (21%)
KELCH repeat 479..523 CDD:276965 13/48 (27%)
Kelch 490..536 CDD:128874 13/52 (25%)
Kelch_1 525..570 CDD:279660 9/49 (18%)
KELCH repeat 526..571 CDD:276965 10/49 (20%)
Kelch_1 573..617 CDD:279660 7/47 (15%)
KELCH repeat 573..617 CDD:276965 7/47 (15%)
AT3G06570NP_566286.1 F-box 29..67 CDD:395521 8/24 (33%)
PHA03098 <126..313 CDD:222983 41/206 (20%)
KELCH repeat 130..169 CDD:276965 9/45 (20%)
KELCH repeat 173..218 CDD:276965 11/44 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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