DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT2G44030

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_181931.1 Gene:AT2G44030 / 819008 AraportID:AT2G44030 Length:380 Species:Arabidopsis thaliana


Alignment Length:129 Identity:31/129 - (24%)
Similarity:56/129 - (43%) Gaps:8/129 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 SVTELNGMIYAIGGYDG-HNRLNTVERYNPRTNQWSVIPPMNMQRSDASACTLQERIYATGGFNG 499
            :|......||.:||:.. ..|.......:.:::||..:|.|.:.|.:|:|..:..:|...||.:.
plant   116 TVVSTGSEIYLLGGFVAKEKRSRRAYVLDCKSHQWRRLPKMRIARKEAAANVIDGKINVYGGCSS 180

  Fly   500 Q--ECLDSAEYYDPVTNVWTRIPNMNHRRSGV-SCVAFRNQLYVIGGFNGTARLSTGERFDPDT 560
            :  ..::..|.|||:|..|...|.....:.|| .|...::.:    .|.....|.:|:.:|..|
plant   181 EYHNSVNWGEIYDPMTQTWEPFPEGALNKEGVIPCALIKDGI----AFPDCGLLISGKVYDTTT 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 31/129 (24%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874
KELCH repeat 385..428 CDD:276965
Kelch 396..442 CDD:128874 1/5 (20%)
Kelch_1 431..476 CDD:279660 9/40 (23%)
KELCH repeat 432..475 CDD:276965 9/39 (23%)
KELCH repeat 479..523 CDD:276965 13/45 (29%)
Kelch 490..536 CDD:128874 13/48 (27%)
Kelch_1 525..570 CDD:279660 8/37 (22%)
KELCH repeat 526..571 CDD:276965 8/36 (22%)
Kelch_1 573..617 CDD:279660
KELCH repeat 573..617 CDD:276965
AT2G44030NP_181931.1 F-box 19..64 CDD:279040
KELCH repeat 112..157 CDD:276965 9/40 (23%)
Kelch_6 115..160 CDD:290672 10/43 (23%)
Kelch_1 159..204 CDD:279660 12/44 (27%)
KELCH repeat 160..204 CDD:276965 12/43 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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