DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klhl10 and AT2G29780

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_180539.1 Gene:AT2G29780 / 817528 AraportID:AT2G29780 Length:398 Species:Arabidopsis thaliana


Alignment Length:421 Identity:76/421 - (18%)
Similarity:136/421 - (32%) Gaps:186/421 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 EEVKEHP----------------YVLECE-AAKPLIVDTFKFMYDLDFLNPQADELTTPPLAMPR 342
            |||:.||                .:..|. .:..|:...|:.:            :::|.|...|
plant    36 EEVENHPPIPRQIPQALIRRTVALIKRCHYPSLSLLSKAFRIV------------ISSPELHQTR 88

  Fly   343 ----LPHEVIFAIGGWSGGTSKGCIETYDTRADRWVTIN---------------AEDPAGPRAYH 388
                |...|::|:.|:...:           ...|..:|               :..|..|    
plant    89 SSLNLTEPVLYALIGFPPHS-----------FPNWFILNHNITRNIPLRLSAIGSLPPMNP---- 138

  Fly   389 GTAV--LGFKIFSIGGYDG------VEYFNTCRVFDAVKKKWNEIAPMHCRRCYVSVTE-LNGMI 444
            |:||  :|:|::.|||..|      ..:...|||...     |.:..|| |..|.:|.| :||.|
plant   139 GSAVVTIGYKMYVIGGLIGPNNPVKTVFVIDCRVHTC-----NYLPTMH-RARYRAVAEVINGKI 197

  Fly   445 YAIGGYDGHNRLNTVERYNPRTNQWSVIPPMNMQRSDASACTLQERIYATGGFNGQECLDSAEYY 509
            |.|||.:        :||:                                        |..|.:
plant   198 YVIGGCE--------KRYD----------------------------------------DWIEVF 214

  Fly   510 DPVTNVWTRIPNMNHRRSG------VSCVAFRNQLYVIGGFNGTARLSTGERFDPDTQTWHFIRE 568
            |.||.:|:.:|:.:|..|.      |:.|..:|::|::..       :.|..:||...||. ..|
plant   215 DVVTGIWSTVPDRSHFMSSLPGGGFVTSVVMQNKIYILDA-------TCGLVYDPIDGTWE-SGE 271

  Fly   569 MNHSRSNFGLE---IIDDMIFAIG-------------------------GFNGVSTISHTECYVA 605
            :..:..::..:   :|:|::::..                         |......:.:.||.:|
plant   272 LGTTLKSYWYKPCCVIEDLLYSFDPYCLQGSPINVYDPNVMVWTPMMGTGIRAFPDLDYFECKMA 336

  Fly   606 E----------------TDEWMEATDMNIVR 620
            .                ||.|  ..:|.:::
plant   337 NFGGKLMVFGATYNNPVTDTW--CIEMALIK 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 74/409 (18%)
BACK 195..298 CDD:285009 2/2 (100%)
Kelch 347..394 CDD:128874 10/63 (16%)
KELCH repeat 385..428 CDD:276965 13/50 (26%)
Kelch 396..442 CDD:128874 15/52 (29%)
Kelch_1 431..476 CDD:279660 13/45 (29%)
KELCH repeat 432..475 CDD:276965 12/43 (28%)
KELCH repeat 479..523 CDD:276965 7/43 (16%)
Kelch 490..536 CDD:128874 11/51 (22%)
Kelch_1 525..570 CDD:279660 11/50 (22%)
KELCH repeat 526..571 CDD:276965 11/50 (22%)
Kelch_1 573..617 CDD:279660 9/87 (10%)
KELCH repeat 573..617 CDD:276965 9/87 (10%)
AT2G29780NP_180539.1 PHA03098 <123..316 CDD:222983 51/258 (20%)
Kelch_1 139..181 CDD:396078 13/46 (28%)
KELCH repeat 139..181 CDD:276965 13/46 (28%)
Kelch_1 184..226 CDD:396078 18/89 (20%)
KELCH repeat 185..226 CDD:276965 18/88 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.