DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AFR

DIOPT Version :9

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_565572.1 Gene:AFR / 816990 AraportID:AT2G24540 Length:372 Species:Arabidopsis thaliana


Alignment Length:310 Identity:74/310 - (23%)
Similarity:125/310 - (40%) Gaps:58/310 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 PHEVIFAIGGWSGGTSKGCIETYDTRADRWVTINAEDPAGPRAY------HGTAVLGF----KIF 398
            |:..:||   ::..|::...::.|..:.||..:    |..|.::      |..:....    |:|
plant    80 PYLFVFA---FNKSTARIQWQSLDLASGRWFVL----PPMPNSFTKISSPHALSCASMPRQGKLF 137

  Fly   399 SIGGYDGVEYFNTCRVFDAVKKKWNEIAPMHCRRCYVSVTELNGMIYAIGGYDGHNRLNT--VER 461
            .:||.|   ...:..|:.|:..:|:.|:||...|.|.....:||.|.|:||..|.|...|  ||.
plant   138 VLGGGD---VNRSAVVYTALTNRWSCISPMMSPRTYFVSGNVNGKIMAVGGSVGGNGEATTEVES 199

  Fly   462 YNPRTNQWSVIPPMNMQRSDASACTLQERIYATGGF--------NGQECLDSAEYYDPVTNVWTR 518
            |:|..:.|:|:..:.|..:...:..:.:.:..|.|:        .||       .||.....|..
plant   200 YDPDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGWAWPFMFPPMGQ-------VYDSDEGTWRE 257

  Fly   519 IP-NMNHRRSGVSCVAFRNQLYVI---GGFNGTARLSTGERFDPDTQTWHFIR----EMNHSRSN 575
            :. .|....:||| |..|::|:||   |.|......|       |..||.::.    :....|..
plant   258 MSGGMKEGWTGVS-VVIRDRLFVISEHGDFPMKVYCS-------DDDTWRYVSGEKLQGEKMRRP 314

  Fly   576 FGLEIIDDMIFAIGGFNGVSTISHTECYVAETDEWMEATDMNIVRSALSA 625
            |.:...||.:|.:     .|.|:..|..|:|......:.:..:|.|..|:
plant   315 FAVTGADDRVFVV-----ASGINVAEGRVSEGQNGDFSVEWRMVSSPKSS 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB 72..186 CDD:279045
PHA03098 86..610 CDD:222983 71/293 (24%)
BACK 195..298 CDD:285009
Kelch 347..394 CDD:128874 9/52 (17%)
KELCH repeat 385..428 CDD:276965 10/52 (19%)
Kelch 396..442 CDD:128874 13/45 (29%)
Kelch_1 431..476 CDD:279660 17/46 (37%)
KELCH repeat 432..475 CDD:276965 17/44 (39%)
KELCH repeat 479..523 CDD:276965 7/52 (13%)
Kelch 490..536 CDD:128874 12/54 (22%)
Kelch_1 525..570 CDD:279660 14/51 (27%)
KELCH repeat 526..571 CDD:276965 14/51 (27%)
Kelch_1 573..617 CDD:279660 10/43 (23%)
KELCH repeat 573..617 CDD:276965 10/43 (23%)
AFRNP_565572.1 F-box 27..72 CDD:279040
Kelch_1 167..214 CDD:279660 17/46 (37%)
KELCH repeat 168..214 CDD:276965 17/45 (38%)
KELCH repeat 217..259 CDD:276965 7/48 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.860

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