DRSC/TRiP Functional Genomics Resources

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Protein Alignment klhl10 and AT2G20380

DIOPT Version :10

Sequence 1:NP_001015100.2 Gene:klhl10 / 3354863 FlyBaseID:FBgn0040038 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_179628.1 Gene:AT2G20380 / 816557 AraportID:AT2G20380 Length:348 Species:Arabidopsis thaliana


Alignment Length:248 Identity:53/248 - (21%)
Similarity:87/248 - (35%) Gaps:81/248 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 LTTPPLAMPRLPHEVIFAIGGW--------SGGTSK--GCIETYDTRADRWVTINAEDPAGPRAY 387
            |.:||:..|.|     .|:|.:        ..|||.  .|:|.|:|....|:      |..|.. 
plant   111 LNSPPVEFPSL-----IAVGSYLYAFRAAIEEGTSDSLNCVEVYNTDTQTWI------PVPPNK- 163

  Fly   388 HGTAVLGFKIFSIGGYDGVEYFNTCRVFDAVKKKWNEIAPMHCRRCYVSVTELNGMIYAIGGYDG 452
                    :||.:....|:.|....::...|.:...|:||:..:...:..||             
plant   164 --------RIFKLQHMKGMLYMKVSKLLSFVAQDAEELAPLFPKLRSLLSTE------------- 207

  Fly   453 HNRLNTVERYNPRTNQ-WSVIP-PMNMQRSDASACTLQERIYATGGFNGQECLDSAEYYDP-VTN 514
                  |..:.|:.:: :.|:. .:|......|.|.::|..|               :||| |..
plant   208 ------VVAFKPKVSEGYEVLGFSVNTDLGRGSFCMIEEITY---------------HYDPSVKF 251

  Fly   515 VWTRIPNMNHRRSGVSCVAFRNQLYVIGGFNGTARLSTGERFDPDTQ---TWH 564
            .|.|      |:.||    :|: |..:.|....||.|:.:..|...:   .||
plant   252 RWRR------RQGGV----WRS-LVGLEGLPKFARYSSVKLADCGGKLVVLWH 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klhl10NP_001015100.2 BTB_POZ 62..>108 CDD:453885
PHA03098 86..610 CDD:222983 53/248 (21%)
KELCH repeat 385..428 CDD:276965 7/42 (17%)
KELCH repeat 432..475 CDD:276965 5/44 (11%)
KELCH repeat 479..523 CDD:276965 10/44 (23%)
KELCH repeat 526..571 CDD:276965 11/42 (26%)
KELCH repeat 573..617 CDD:276965
AT2G20380NP_179628.1 F-box_AtAFR-like 19..60 CDD:438923
Kelch_6 118..161 CDD:404790 13/53 (25%)
KELCH repeat 120..161 CDD:276965 12/51 (24%)
Blue background indicates that the domain is not in the aligned region.

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