DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15408 and MSS1

DIOPT Version :9

Sequence 1:NP_608767.1 Gene:CG15408 / 33548 FlyBaseID:FBgn0031523 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_198006.1 Gene:MSS1 / 832703 AraportID:AT5G26340 Length:526 Species:Arabidopsis thaliana


Alignment Length:428 Identity:105/428 - (24%)
Similarity:181/428 - (42%) Gaps:75/428 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SMLGMGSVTGNILIGCLLGRLGSKRCLLLIAIPHSCFWI----LVYFAQSVEYLYVGRLLAGICG 129
            |.|.:..:|...........|| :|..:|||   ..|:|    |...||.:..|..||:|.| ||
plant    88 SSLYLAGLTATFFASYTTRTLG-RRLTMLIA---GVFFIIGVALNAGAQDLAMLIAGRILLG-CG 147

  Fly   130 GGM-YIVHPILLSEIADANIRGTFSAMVMLSVNVGILVGYII--GT-----------HLPYYSIP 180
            .|. ....|:.|||||...|||..:.:..|:|.:|||...::  ||           .|....||
plant   148 VGFANQAVPLFLSEIAPTRIRGGLNILFQLNVTIGILFANLVNYGTAKIKGGWGWRLSLGLAGIP 212

  Fly   181 LMVLILPLWYLISVLLFIKESPMHLIRIGKYSAAERSFRYYKNIKDSDNIHDQNRAMEEFEIMKI 245
            .::|.:.       .|.:.|:|..|:..|:....:...|   .|:.:||:..:  ..:..|..::
plant   213 ALLLTVG-------ALLVTETPNSLVERGRLDEGKAVLR---RIRGTDNVEPE--FADLLEASRL 265

  Fly   246 ALTKGDALQDAVTFKDFYSRPALKAYGPALVLLIANQFSGLFTMVNYMSDIFANSGSTMDPDT-C 309
            |.......::.:..:   :||.|..   |:.|.|..|.:|:..::.|...:|:..|...|... .
plant   266 AKEVKHPFRNLLQRR---NRPQLVI---AVALQIFQQCTGINAIMFYAPVLFSTLGFGSDASLYS 324

  Fly   310 TIIIGAVQILGTYVTTLLCDICGRKLLMLVSTGGVAISLTAFGFFTKYA-----------ESHNI 363
            .::.|||.:|.|.|:....|..||::|:|  ..||.:      ||::..           .|.|:
plant   325 AVVTGAVNVLSTLVSIYSVDKVGRRVLLL--EAGVQM------FFSQVVIAIILGVKVTDTSTNL 381

  Fly   364 GEYSWIPLLLM---SMDIFLGNIGLVGCFFVSLVEMFPVKIRAKAASMAIVVCSIFVFLMLNIF- 424
            .:...|.:::|   .:..|..:.|.:|....|  |.||::.|:...|:.:.|..:|.|::...| 
plant   382 SKGFAILVVVMICTYVAAFAWSWGPLGWLIPS--ETFPLETRSAGQSVTVCVNLLFTFIIAQAFL 444

  Fly   425 -PICMKQWGISA--TMWSCAGVTALSSLYFTYFMKETK 459
             .:|..::||..  :.|     ..:.|::..:.:.|||
plant   445 SMLCHFKFGIFIFFSAW-----VLIMSVFVMFLLPETK 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15408NP_608767.1 2A0115 17..410 CDD:273327 93/373 (25%)
MFS 60..455 CDD:119392 102/422 (24%)
MSS1NP_198006.1 MFS_STP 29..475 CDD:340919 102/424 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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